Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11387 ATGGCTCCATTTCCCTCTCTCATTTTCTTATTCTTCATTGCAACACTCTCACTACTACCTTCTTCATTTTCCTCTTCTTCTTCTGACCCAGAAAGGAAAACCTTCATCATCCAAGTCCACCATGACGCCAAGCCTTCCATTTTCCCAACCCATAAGCACTGGTACGAGTCCTCCCTCTCCTCCATTTCCTCCTCCACCAACCCCATCATCCACACTTACGACACCGTTTTCCATGGTTTCTCTGCAAAGCTCTCACCTTTAGAGGCCCAGAAGCTGCAATCACTCTCCCACGTCATCACCCTCATTCCGGAACAAGTTCGCCACCTCCACACCACTCGTTCCCCTCAGTTTCTCGGTCTCAAAACCGCCGACAGAGCCGGGTTGCTCCACGAGACTGATTTCGGGTCGGATCTCGTCATTGGAGTCATCGACACCGGAATCTGGCCTGAGAGACAGAGCTTTAACGACCGCGACCTGGGTCCCGTTCCCGCCAAATGGAAGGGCCAGTGCGTCGCCGGGAAAGGCTTTCCGGCGAGCTCCTGCAACCGGAAACTCATCGGAGCACGGTATTTCTCGGCCGGGTTCGAAGCCACCAACGGGAAGATGAACGAGACGACGGAATATCGTTCTCCAAGGGACTCCGACGGCCACGGGACGCACACGGCGTCGATCGCCGCCGGAAGGTACGTGTCGTCGGCGTCCACATTGGGTTACGCTAAAGGTGTTGCCGCCGGTATGGCTCCCAAGGCTCGCCTTGCCGTCTACAAGGTGTGCTGGACTGGCGGTTGCTACGACTCCGACATCCTCGCGGCGTTCGACGCCGCCGTCTCCGACGGCGTCGACGTAGCCTCCCTCAGCGTCGGAGGTGTGGTGGTGCCGTACCACCTCGACGTCATTGCCATAGGTGCTTTTGGAGCCTCAAGCGCCGGCGTTTTTGTCTCTGCCTCCGCCGGCAACGGTGGTCCCGGCGGCCTAACCGTCACCAATGTGGCACCTTGGGTGACCACTGTTGGTGCTGGAACCATAGACAGAGATTTCCCTGCTGATGTGAAGCTTGGAAATGGTAAGATTATACCTGGGGTTAGTATTTATGGTGGGCCGGGTCTAACTCCGGGTCGGATGTACCCGGTTGTGTATGCGGGTACTGAACAAGGTAGTGGAGGAGGAGGGGGTGATGGTTATTCTTCTTCACTTTGCTTAGAAGGTTCATTGGATCCTAAGTTTGTAAAGGGCAAGATTGTTGTGTGTGATAGGGGCATTAATTCAAGAGCTGCCAAAGGTGAAGTGGTGAAAAAAGCTGGTGGAATTGGCATGATTTTGGCTAATGGGGTGTTTGATGGTGAAGGGTTAGTGGCTGATTGCCACGTGTTGCCGGCCACCGCCGTCGGCGCTAGCGGCGGAGATGAAATCCGGAGTTACATTGCAGCAGGGGCTAAATCAAGGTCACCACCCACTGCCACTATTGTGTTTAAAGGAACTAGGCTTGGGGTTAGGCCAGCACCTGTTGTGGCATCATTTTCAGCTAGAGGGCCTAATCCTGAATCCCCTGAGATTTTGAAGCCAGATGTTATAGCACCTGGATTGAACATACTTGCTGCTTGGCCTGATAGAGTTGGACCTTCTGGGGTTCCTTCTGATGGGCGTAGGACTGAGTTTAACATACTTTCTGGGACTTCAATGGCTTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCTCATCCAGATTGGAGTCCTGCTGCTATTAGGTCAGCTCTTATGACCACTGCTTATACTGTTGATAATAGGGGTCATACCATGTTGGATGAGTCCACTGGGAATGTTTCCTCAGTGTTTGATTATGGAGCTGGCCATGTTCATCCTGAGAAGGCCATGGACCCTGGCTTGGTTTATGATATTTCTAGTTTTGATTATGTGGATTTCTTGTGTAATTCAAATTACACCACTAAGAATATTCAAGTGATCACAAGGAAGGGTGCAGATTGCAGTGGGGCAAAGAAGGCAGGACATTCTGGGAACTTGAATTACCCATCACTGTCTGCAGTGTTTCAACAATATGGTAAGCATAAAATGTCCACACATTTTATTAGAACTGTGACCAATGTTGGGGACCCCAATTCAGTCTACAAAGTCACAATTAAACCACCTGCTGGAATGGTGGTCACTGTCCAGCCAGAGACCCTATCTTTCAGGAGGGTGGGTCAAAAGTTGAACTTTCTTGTTAGGGTGAAAACTAGGGCAGTTAAGCTTTCCCCTGGAAGTTCTAGTGTGAAGAGTGGTTCCATAGTTTGGTCTGATGGCAAGCACATTGTCACAAGTCCCTTAGTTGTGACAATGCAGCAACCTCTTGATTAG 2361 0.5116 MAPFPSLIFLFFIATLSLLPSSFSSSSSDPERKTFIIQVHHDAKPSIFPTHKHWYESSLSSISSSTNPIIHTYDTVFHGFSAKLSPLEAQKLQSLSHVITLIPEQVRHLHTTRSPQFLGLKTADRAGLLHETDFGSDLVIGVIDTGIWPERQSFNDRDLGPVPAKWKGQCVAGKGFPASSCNRKLIGARYFSAGFEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVSSASTLGYAKGVAAGMAPKARLAVYKVCWTGGCYDSDILAAFDAAVSDGVDVASLSVGGVVVPYHLDVIAIGAFGASSAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVKLGNGKIIPGVSIYGGPGLTPGRMYPVVYAGTEQGSGGGGGDGYSSSLCLEGSLDPKFVKGKIVVCDRGINSRAAKGEVVKKAGGIGMILANGVFDGEGLVADCHVLPATAVGASGGDEIRSYIAAGAKSRSPPTATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGVPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGHTMLDESTGNVSSVFDYGAGHVHPEKAMDPGLVYDISSFDYVDFLCNSNYTTKNIQVITRKGADCSGAKKAGHSGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSVYKVTIKPPAGMVVTVQPETLSFRRVGQKLNFLVRVKTRAVKLSPGSSSVKSGSIVWSDGKHIVTSPLVVTMQQPLD. 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11387 786 Pfam PA domain 375 469 IPR003137 -
Seca3g11387 786 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Seca3g11387 786 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Seca3g11387 786 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Seca3g11387 786 SUPERFAMILY Protease propeptides/inhibitors 33 108 - -
Seca3g11387 786 Gene3D - 644 782 - -
Seca3g11387 786 Gene3D - 343 496 - -
Seca3g11387 786 FunFam Subtilisin-like protease SBT1.5 644 782 - -
Seca3g11387 786 Gene3D Peptidase S8/S53 domain 137 640 IPR036852 GO:0004252|GO:0006508
Seca3g11387 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 63 779 IPR045051 -
Seca3g11387 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Seca3g11387 786 FunFam Subtilisin-like protease SBT1.9 23 110 - -
Seca3g11387 786 Pfam Peptidase inhibitor I9 34 110 IPR010259 -
Seca3g11387 786 FunFam Subtilisin-like protease SBT1.5 137 353 - -
Seca3g11387 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Seca3g11387 786 FunFam subtilisin-like protease SBT1.5 343 495 - -
Seca3g11387 786 Pfam Subtilase family 135 608 IPR000209 GO:0006508|GO:0008236
Seca3g11387 786 Pfam Fibronectin type-III domain 675 779 IPR041469 -
Seca3g11387 786 CDD PA_subtilisin_like 349 488 - -
Seca3g11387 786 ProSiteProfiles Serine proteases, subtilase domain profile. 117 627 - -
Seca3g11387 786 CDD Peptidases_S8_3 108 593 IPR034197 -
Seca3g11387 786 SUPERFAMILY Subtilisin-like 109 631 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11387 Seca-Chr3 261895371 261897731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11387 34 785 Subtilisin-like Serine Gene Family AT3G14240 79.178 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11387 - - gmx:100808511 1316.21