Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11322 ATGGAAGCACAAAGCTCTCAGCATGAGCAAGTTGTTGAAATCAGTGGAGATCTTCCTGATGGGGGAAGGAAAATTTGTGGGGAAGCACCATGTGGGTTCTCTGATGCTGGATCTGTCTCTAAGGATTCTCAAGAGCGATCAACTTCAATGCGAAAGCTTTTGATGGCAGTGGTGCTTTGTGTTATTTTCATGACCATTGAAGTAGTTGGTGGCATCAAAGCTAACAGTCTTGCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCTGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCGGGATGGGAAGCTACTCCTCGTCAGTCATATGGATTCTTTAGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAATTAATATGGCTGCTTGCTGGGATTCTGGTATACGAAGCCATTGATAGAATCATTGCTGGTCCTAAAAATGTGGATGGTTTTTTAATGTTCTTAGTAGCAGCATTTGGTCTCGTGGTTAACATCATTATGGCGTTTTTATTGGGCCATGATCACGGCCATGGCCACGGCCACAGCCACGGCCATGGACATGGACATGATCATCATCATGGCCACAGCCATGGATTTTCAGTGTCTACCCACCATGATGTAAAGCATGCAAAAGATGAGCACCATCACACTCATGATGTTCACACACACCATCATGATGAAAAGCATCCAAAAGATGCACACCAACACTCTCATGAAGATCACATGCACCATGATGCCCACAAAGAGGTTACTGAACCACTTCTGGGTGAATCAGAAAGCAGATCAGAGAAGAAGAAGAAGCAGAAGAACATAAATGTACAGGGAGCGTATCTCCATGTACTTGGGGACTCAATCCAGAGTGTTGGGGTAATGATAGGGGGAGCAATCATATGGTATAAACCTGATTGGCAAATAGTTGATTTAATTTGCACTCTAATCTTCTCAGTAATTGTTTTGGGTACAACAATCAACATGCTGCGAAACATTTTGGAAGTCCTGATGGAAAGCACACCACGTGAGATTGATGCTACTGAGCTGGAAAGTGGGTTATTACAGATGGAAGAAGTAGTGGCTGTTCATGAGCTGCACATATGGGCCATTACGGTGGGGAAGGTTTTGCTAGCTTGTCATGTTAAAATCAGACGTGATGCAGATGCAGACATGGTGCTAGACAAGGTTATAGACTACATCAGAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1251 0.4333 MEAQSSQHEQVVEISGDLPDGGRKICGEAPCGFSDAGSVSKDSQERSTSMRKLLMAVVLCVIFMTIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKNVDGFLMFLVAAFGLVVNIIMAFLLGHDHGHGHGHSHGHGHGHDHHHGHSHGFSVSTHHDVKHAKDEHHHTHDVHTHHHDEKHPKDAHQHSHEDHMHHDAHKEVTEPLLGESESRSEKKKKQKNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPDWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATELESGLLQMEEVVAVHELHIWAITVGKVLLACHVKIRRDADADMVLDKVIDYIRRVYNISHVTIQIER. 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11322 416 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 339 IPR027469 -
Seca3g11322 416 Pfam Cation efflux family 53 338 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Seca3g11322 416 MobiDBLite consensus disorder prediction 182 198 - -
Seca3g11322 416 MobiDBLite consensus disorder prediction 181 252 - -
Seca3g11322 416 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 15 416 - -
Seca3g11322 416 Gene3D Cation efflux protein transmembrane domain 49 337 IPR027469 -
Seca3g11322 416 MobiDBLite consensus disorder prediction 199 252 - -
Seca3g11322 416 NCBIfam cation diffusion facilitator family transporter 50 416 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Seca3g11322 416 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 344 415 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11322 Seca-Chr3 261209368 261210639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11322 7 416 Inorganic Solute Cotransporters AT3G58810 64.904 1.96e-169 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11322 K14689 - gmx:100790458 646.351