Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11312 ATGGCTAACCACATTTGTCTCTCTCTGTGGTTCTCTTATATCACATTTGTTTCCACATTGGCTCAGTCTGATAATTATATCATCCACATGGACTTATCAGCCATGCCCAAAGCATTCTCCACCCAACATAGTTGGTATCTATCCACTCTTTCCTCTGCACTACTTACTCTTAACTCTTTTTCTTCTAAGCTTATTTATACATACACCAATGTCATGAATGGTTTCAGTGCAAGTCTGTCACCTACAGAGCTTGAAGCTCTTAAAACCTCTCCTGGTTACATTTCATCCATTCCTGATTTACCTGTCAAGCTTGACACAACCTACTCACCTCATTTCCTTGGCCTCAATCCCCACATAGGTGCATGGCCTGCTTCTGAGTTTGGCAAAGATATCATTGTTGGTTTGGTGGACACTGGAGTTTGGCCAGAGAGTGAAAGCTTCAGAGATTATGGGATGACTAAAATTCCTTCAAGATGGAAAGGCCATTGTGAAAATACCATCCAATTCAACTCATCACTTTGCAACAAGAAACTCATTGGAGCTAGGTTCTTTAACAAAGGGTTGCTTGCCAAAAACCCCAACATCACCACAATTGTGAACTCTACCCGTGACACTGAAGGTCACGGGACTCACACTTCAACCACTGCAGCTGGGAGCCAAGTTGAGGGTGCATCATACTTTGGTTATGCCTCTGGAACAGCCACAGGAATAGCTTCACAGGCAAGGGTAGCTATGTACAAGGCCCTTTGGGAAGAAGGAGCCTACACATCTGATGTAATAGCTGCAATTGATAGTGCAATATCAGATGGTGTAGATGTTCTTTCATTATCATTTGGTTTTGATGATGTCCCCTTGTACAAAGACCCTGTTGCTATAGCCACATTTGCAGCCATGGAGAAGGGTATTTTTGTGTCCACTTCAGCAGGGAATGAAGGGCCTTGGCTTAAAACTCTGCATAATGGAACACCATGGGTTATAACAGTGGCTGCTGGTACTTTAGATAGAGAATTTCATGGGACTCTTATGCTTGGCAATGGAATCCCAATCACAGGCTTGTCTCTCTATCCAGGAAAATTCTCTGCCCACCAACTTCCAATTGTTTTCATGGGTTTGTGTGACAGTGTGAAGGAACTGGCCAAAGTAAAGAGCAAGGTTGTGGTGTGTGAAGACAAGAATTCAACAATTTCTGATCAAGTGTCTAATGTAGACACAGCAAAAGTTACAGGGGCTGTGTTCATAACTAACAGCACTGACAGTTCATTCTTCTTAGAGAATAGTTTTGCATCCATCATTGTTAGCCCAATGAATGGAGAAATTGTCAAAGCATACATCAAGAGTAACTCTGATTCAAAAGCAAGCATGACATTTAAGATAACAGCTTTTGGTACTAGACCAGCACCAAGTGTGGATAGTTACAGTTCTAGAGGACCATCAAATAGTTGTCCATTTGTGTTGAAACCAGACATCACAGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAAAGTTCCAGTGGATGAGTTAGGTTCCCATAAACTCTATAGCAACTTCAATTTGTTAAGTGGCACATCCATGGCATGCCCTCATGTTGCAGGGGTGGCAGCACTTTTAAAAGGTGCACACTCTGATTGGAGCCCTGCAGCTATTCGGTCAGCTATCATGACAACCTCGGACATGTTTGACAATACTATGGGACCCATCAAAGACATTGGTGAAGGTTACAAAACAGCTTCTCCTCTAGCATTGGGAGCTGGTTACATAAACCCCAACAGAGCCCTTGACCCTGGACTTGTTTATGATGTGGGAGTAAAAGATTATGTGAATCTTCTCTGTGCATTGAACTTCACACAGAAGAACATCACAGCCATAACTAGATCCTCTTCCAATGATTGCTCTAAACCTTCCTTGGATCTTAACTACCCTTCTTTTATTGCTTTCTTCAATGCCAACAATTCTTCTTCAGGGGCAATACAAGAATTTCAGAGAACAGTGACCAATGTTGGGGAGGGACCAACAATTTATGCTGCTAGCATTACTCCCATCAAAGGGTTCCGTGTCAATGTCATCCCCAACAAGTTGGTGTTCAAAGAGAAGAACGAGAAGCTAAGCTACAAGTTGAGGATTGAGGGTCCAATAACAAAGACCAAAGTAAAGAAAGTAGCTTTTGGGTACCTCAATTGGATGGACGTGAAGCATGTGGTGAGGAGCCCTATTGTGGTCACCACCCTCAAATTCGATTTCTAG 2247 0.4277 MANHICLSLWFSYITFVSTLAQSDNYIIHMDLSAMPKAFSTQHSWYLSTLSSALLTLNSFSSKLIYTYTNVMNGFSASLSPTELEALKTSPGYISSIPDLPVKLDTTYSPHFLGLNPHIGAWPASEFGKDIIVGLVDTGVWPESESFRDYGMTKIPSRWKGHCENTIQFNSSLCNKKLIGARFFNKGLLAKNPNITTIVNSTRDTEGHGTHTSTTAAGSQVEGASYFGYASGTATGIASQARVAMYKALWEEGAYTSDVIAAIDSAISDGVDVLSLSFGFDDVPLYKDPVAIATFAAMEKGIFVSTSAGNEGPWLKTLHNGTPWVITVAAGTLDREFHGTLMLGNGIPITGLSLYPGKFSAHQLPIVFMGLCDSVKELAKVKSKVVVCEDKNSTISDQVSNVDTAKVTGAVFITNSTDSSFFLENSFASIIVSPMNGEIVKAYIKSNSDSKASMTFKITAFGTRPAPSVDSYSSRGPSNSCPFVLKPDITAPGTSILAAWPQKVPVDELGSHKLYSNFNLLSGTSMACPHVAGVAALLKGAHSDWSPAAIRSAIMTTSDMFDNTMGPIKDIGEGYKTASPLALGAGYINPNRALDPGLVYDVGVKDYVNLLCALNFTQKNITAITRSSSNDCSKPSLDLNYPSFIAFFNANNSSSGAIQEFQRTVTNVGEGPTIYAASITPIKGFRVNVIPNKLVFKEKNEKLSYKLRIEGPITKTKVKKVAFGYLNWMDVKHVVRSPIVVTTLKFDF. 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11312 748 Pfam Peptidase inhibitor I9 26 104 IPR010259 -
Seca3g11312 748 Gene3D Peptidase S8/S53 domain 130 607 IPR036852 GO:0004252|GO:0006508
Seca3g11312 748 Pfam Subtilase family 128 559 IPR000209 GO:0006508|GO:0008236
Seca3g11312 748 FunFam Subtilisin-like protease SBT1.9 14 105 - -
Seca3g11312 748 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Seca3g11312 748 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Seca3g11312 748 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Seca3g11312 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 741 IPR045051 -
Seca3g11312 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 105 IPR037045 -
Seca3g11312 748 Pfam Fibronectin type-III domain 638 741 IPR041469 -
Seca3g11312 748 SUPERFAMILY Subtilisin-like 104 598 IPR036852 GO:0004252|GO:0006508
Seca3g11312 748 CDD PA_subtilisin_like 343 453 - -
Seca3g11312 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Seca3g11312 748 ProSiteProfiles Serine proteases, subtilase domain profile. 107 594 - -
Seca3g11312 748 CDD Peptidases_S8_3 102 559 IPR034197 -
Seca3g11312 748 Gene3D - 334 462 - -
Seca3g11312 748 FunFam Subtilisin-like protease SBT1.5 130 343 - -
Seca3g11312 748 Gene3D - 611 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11312 Seca-Chr3 261106626 261108899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11312 1 730 Subtilisin-like Serine Gene Family AT5G67090 46.452 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11312 - - gmx:100783026 1144.03