Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11296 ATGTTGGAAAGTACTGGAGAAGATAACAACTTGAACGAAGTTCCGGTTACAAATATTCATAAGAGAAAGAAAGTGGATATACGAAAAGGGTGTGTACCAATCAAGGTAGGGGAAGGTGAAGAGCAACAGAAGATAGTGGTGCCTGTGATGTACATCAACCACCCACTGTTCTCTCAGTTACTAAAGGAGGCAGAGGAAGAGTATGGTTTTGATCACCAGGGAACCATAATCATCCCTTGTCGCGTGGAGGAATTTAGGCATATTCAGAGCCTCATTGATAGGGAGATGTGCCCCCAACAACACCACCACCATGTCATTAACTGTTTCAAGCCTTCATGTCAATAA 345 0.4319 MLESTGEDNNLNEVPVTNIHKRKKVDIRKGCVPIKVGEGEEQQKIVVPVMYINHPLFSQLLKEAEEEYGFDHQGTIIIPCRVEEFRHIQSLIDREMCPQQHHHHVINCFKPSCQ. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11296 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 88 IPR003676 GO:0009733
Seca3g11296 114 Pfam Auxin responsive protein 22 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11296 Seca-Chr3 260727918 260728262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11296 26 93 Calmodulin-binding Proteins AT3G43120 42.647 1.69e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11296 K14488 - gmx:100808516 155.221