Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11291 ATGACAAGCCACATTGATAACCTCTGGGTGCTGGCCTTACCATCCAAATGCACCCAAGAAAACATTGCATGGTCACTTTTGATCATGGCCATACTCTGGCTAGCCATGACTTTCTTTTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTCCTACTCTACCTGGAGAAAAACCTCTCCTAGTACTACTACTACTTCTACTTCAGGTTCAGACCATAACAACAATCAAATAATTCCTGGTCCCAAAGGCTATCCTTTAATTGGAAGCATGAACCTCATGTCCTCACTTGCACACCACCGTATTGCTGCGGCGGCAAAAGCATGCAACGCCACCAGGCTCATGGCTTTCAGCCTCGGTGACACACGTGCCATAGTCACGTGCCACCCAGACGTTGCCAAAGAGATTCTCAACAGCTCCGTCTTCGCTGATCGTCCTATCAAGGAATCTGCTTATAGTCTCATGTTCAACCGCGCCATCGGGTTCGCCCCTTACGGTGTTTACTGGCGAACCTTGCGAAAGATCGCCACCAAGCACCTCTTCTCTCCCATGCAAATCAAGTCCTCGGAGATTCAGCGCTCCGAAATCGCCAACCAGATGGTCCACATGTTTAGAAACCGCCTTCCTTCTCCTACTCCTACCAGTGGCGGTTTCACCGTACGCGGGGTTCTCAAGAAAGCCTCGCTGAATAACATGATGTGGTCCGTGTTTGGACAGAGGTATAAGCTAAACGAGGCAAACAAGGGAATGGAGGAGCTGCGTGGGTTAGTGGAACAAGGGTATGACCTTTTGGGTACCCTTAATTGGGGTGACCACCTCCCTTTCCTTAAGGACTTTGACGCCCAAAAAATCCGGTCCACCTGCTCTAAACTCGTTCCTAAAGTGAACCGGTTCGTCGGTTCAATCATCGCCGACCACCGAGCCGACAAAACCCAAACCAACCGGGATTTCGTTCATGTCTTGCTCTCTCTTCAAGAACCCGATAAATTGTCTGACCCCGACATGATTGCTGTACTCTGGGAAATGATATTTAGGGGGACCGACACCGTGGCGGTTTTGATCGAGTGGATACTAGCGAGGATGGTGCTTCATCCTGATGTGCAGAGGAAGGTGCAAGAGGAACTCGATGAGGTGGCTGGTGGAGGCTCACGCGCCTTCACGGAGGAGGATGTGGCGGCGACGGTGTACCTGCCGGCGGTGGTGAAGGAGGTTCTGAGGCTGCACCCACCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCCATCACTGATACGACCATTGATGGGTATCACGTGCCCGCTGGGACCACGGCCATGGTTAATATGTGGGCCATAGCTAGGGACCCTGTGGTATGGAGGGACCCACTTGAATTTATGCCTGAGAGGTTCATGGGAGGAGAAGGGGCTGACTTCTCAGTTTTCGGGTCGGATCTTAGGCTCGCTCCATTTGGGGCGGGTAGGAGGAGTTGCCCCGGGAAGACTCTGGGTTTGACCACCGTGACCTACTGGGTGGCTAAGCTTGTGCACGAGTTTGAATGGCTACCGTCCGATGATGATGGGGTTGATCTAACGGAGGTGCTGAGGCTCTCTTGTGAAATGGCTAATCCTCTCACCGTTCAAGTGCGTCCCAGGCGTTGA 1641 0.5283 MTSHIDNLWVLALPSKCTQENIAWSLLIMAILWLAMTFFYWSHPGGPAWGKYYSYSTWRKTSPSTTTTSTSGSDHNNNQIIPGPKGYPLIGSMNLMSSLAHHRIAAAAKACNATRLMAFSLGDTRAIVTCHPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRKIATKHLFSPMQIKSSEIQRSEIANQMVHMFRNRLPSPTPTSGGFTVRGVLKKASLNNMMWSVFGQRYKLNEANKGMEELRGLVEQGYDLLGTLNWGDHLPFLKDFDAQKIRSTCSKLVPKVNRFVGSIIADHRADKTQTNRDFVHVLLSLQEPDKLSDPDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPDVQRKVQEELDEVAGGGSRAFTEEDVAATVYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAIARDPVVWRDPLEFMPERFMGGEGADFSVFGSDLRLAPFGAGRRSCPGKTLGLTTVTYWVAKLVHEFEWLPSDDDGVDLTEVLRLSCEMANPLTVQVRPRR. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11291 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 484 493 IPR017972 GO:0005506|GO:0016705
Seca3g11291 546 FunFam Cytochrome P450 78A5 73 545 - -
Seca3g11291 546 CDD CYP78 114 538 - -
Seca3g11291 546 PANTHER CYTOCHROME P450 78A7-RELATED 1 546 - -
Seca3g11291 546 Gene3D Cytochrome P450 67 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS E-class P450 group I signature 400 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS E-class P450 group I signature 442 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS E-class P450 group I signature 481 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS E-class P450 group I signature 491 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 Pfam Cytochrome P450 82 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS P450 superfamily signature 491 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS P450 superfamily signature 482 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11291 546 SUPERFAMILY Cytochrome P450 81 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11291 Seca-Chr3 260622150 260624375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11291 1 546 Cytochrome P450 AT2G46660 65.336 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11291 K20619 - gmx:100798388 872.078