Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11290 ATGGGTTCAAATTCCAAAACTTTCACCTTTGATGAGGTGGCTAAGCACAATCATAAGAAGGATTGCTGGATCATAGTCAATGGAAAGGTATATGATGTCACCCCATTTTTGGAAGATCATCCGGGAGGTGATGAAGCTTTACTGTCTGCTGCAGCAGAGAAGGATGCCACCACTGATTTTGAAGATGTTGGCCACAGTGACTCAGCGGTAGAAATGATGGAAAAATACTTTGTTGGGGAGGTTGACAGCACTACTCTTCCAGCAAAAGTTAGCAGCAATCCTCCACGACCAACACAAGCACCTGCTTATAGCAATGAATCTTCTGGATTTGTTGTGAAGATGTTGCAGTACTTGGTGCCATTGCTGATATTGGGCTTTGCATTTGCCCTGCAGTACTTTGGCAAGAAAAGCAAGTCCGACGAATCATGA 429 0.4406 MGSNSKTFTFDEVAKHNHKKDCWIIVNGKVYDVTPFLEDHPGGDEALLSAAAEKDATTDFEDVGHSDSAVEMMEKYFVGEVDSTTLPAKVSSNPPRPTQAPAYSNESSGFVVKMLQYLVPLLILGFAFALQYFGKKSKSDES. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11290 142 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Seca3g11290 142 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Seca3g11290 142 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Seca3g11290 142 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Seca3g11290 142 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Seca3g11290 142 Gene3D - 1 86 IPR036400 -
Seca3g11290 142 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 81 IPR001199 -
Seca3g11290 142 FunFam Cytochrome b5 type B 2 86 - -
Seca3g11290 142 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 89 IPR036400 -
Seca3g11290 142 SMART Cyt_b5_2 8 82 IPR001199 -
Seca3g11290 142 PANTHER CYTOCHROME B5 3 135 - -
Seca3g11290 142 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 82 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11290 Seca-Chr3 260611033 260615506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11290 1 136 NADPH P450 reductases AT5G53560 56.204 2.69e-56 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11290 K23490 - gmx:100305546 230.335