Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11108 ATGGAAACTTGCACGGCTCTGCTTTTTTTAACGGCGATCACGGCATACCTGCTATGGTTCACTTTCATCTCACGGTCATTGAGAGGTCCACGTGTCTGGCCTCTATTGGGTAGTCTCCCGGGCCTAATAGAGAACTGTGATCGCATGCATGACTGGATCTGCGACAACCTCCGCACCTGCATCTGTGCAATCCCCTTCCTAGCCAAGAGGCAAGGTCTCGTGACTGTCACGTGCGACCCGAGGAACCTCGAGCACATACTCAAGACCCGCTTCGACAATTACCCCAAAGGTCCCACGTGGCATGCTGTGTTCCATGATCTGTTAGGAGATGGGATCTTCAACTCTGATGGTGACACGTGGCTGTTCCAGCGTAAGACCGCCGCACTGGAATTCACCACCAGAACCCTACGCCAAGCCATGGCTCGGTGGGTGACCCGAGCCATCAAGGACCGGCTCTGCTTGATCCTCAAGAATGCCGAGCTACAAGCCGAACCGGTGGATCTACAAGACCTGATGCTCCGGCTCACGTTTGATAACATTTGCGGTTTGGCTTTTGGAAGGGACCCACAGACCTGTGCTCCGGGGCTGCCTGAAAACCGGTTCGCAACGGCTTTCGACCGAGCCACCGAAGCCACGCTCCAGCGGTTTATTTTGCCTGAGGTGTTGTGGAAAGTGAAGAAATGGCTTCGGCTCGGAATGGAAGTTAGCTTGAACCGAAGCCTTGTCTACGTGGACGAACATTTGTCTAGTGTTATTGAGAAGCGTAAAGTTGAACTGCTGAGTCAGCAAAAAGATGGGACCCTTCATGATGACTTGCTCACAAGGTTTATGAAGAAAAAGGAGTGCTACTCAGACAAGTTCCTCCAACACGTGGCACTGAACTTCATCCTAGCTGGACGTGACACGTCATCAGTGGCGCTTAGCTGGTTTTTCTGGCTGGTGATTCAGAACCCGAGGGTGGAAGAGAAAATTTTACGGGAGATCTGCACGGTCCTGATGGAGACACGTGGCGATGATGTGGCGAAGTGGGTGGATGAGCCGTTGGTGTTTGAGGAAGTTGACCGTTTGGTTTATCTCAAGGCTGCGTTGTCAGAGACGCTGAGGCTGTACCCTTCGGTGCCGGAGGATTCAAAGCATGTGGTGGCTGATGATGTGTTGCCGGACGGAACGTTTGTTCCGGCGGGATCGTCGGTGACGTATTCGATATATTCGGCGGGGAGGTTGAAGTCCACGTGGGGTGAGGATTGCATGGAGTTTCGACCTGAGAGGTGGTTGTCATTGGATGGGACAAAGTTCACCATGAAGGACTCTTTCAAGTTTGTTGCTTTCAATGCTGGTCCAAGGATATGTTTGGGGAAGGATTTGGCTTATTTGCAGATGAAATCCATCGCCGCCGCGGTGCTGCTCCGCCACCGGCTTGTGATGGTGCCTGGCCACCAGGTGGAGCAGAAGATGTCACTCACCTTGTTCATGAAAAATGGGCTCAGGGTCAATGTGCACAACAGGGATTTGAAGGGGGTTTTGGCAAGTTTACAAAAAGAAAGGGAGGTAGAGATCCAGGGGAAAGAGTCCGCAGATTTGAGATGCAATGGAAGTTAG 1599 0.5228 METCTALLFLTAITAYLLWFTFISRSLRGPRVWPLLGSLPGLIENCDRMHDWICDNLRTCICAIPFLAKRQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVTRAIKDRLCLILKNAELQAEPVDLQDLMLRLTFDNICGLAFGRDPQTCAPGLPENRFATAFDRATEATLQRFILPEVLWKVKKWLRLGMEVSLNRSLVYVDEHLSSVIEKRKVELLSQQKDGTLHDDLLTRFMKKKECYSDKFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRVEEKILREICTVLMETRGDDVAKWVDEPLVFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCMEFRPERWLSLDGTKFTMKDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLVMVPGHQVEQKMSLTLFMKNGLRVNVHNRDLKGVLASLQKEREVEIQGKESADLRCNGS. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11108 532 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 Gene3D Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 SUPERFAMILY Cytochrome P450 27 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Seca3g11108 532 CDD CYP86A 60 495 - -
Seca3g11108 532 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 Pfam Cytochrome P450 28 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11108 532 PANTHER CYTOCHROME P450 19 496 - -
Seca3g11108 532 FunFam Cytochrome P450 21 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11108 Seca-Chr3 258252852 258254471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11108 1 513 Cytochrome P450 AT2G45970 78.503 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11108 K15398 - gmx:100779986 976.467