Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11099 ATGGCAAAGAAGTCCCAAAGACGCCCTGTGCGGTATGAGAGAGATAAATCAGGCTGTATGTGGGGTTTTATTAGTATGTTTGATTTTCGCCATGGCCACACTACTAGGAAGTTGATTGCGGATAAGAGGCGAAGCAGCAAGCATGCAGTTGGTGCTGTACATTCTAAGAACAAGATTGAGATGTTAAGCAATATGGATGAAGTTTGTCAAGGCAGTTTTGACAATGGAGAGAGTAAAAGGTCAACAGTGAGAACTACTGCTAACAAGCCTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCACTGACCAAAATGCAATTAAGGATACAAATAGTGCTGAAGTGGAATCAAAGGATTCCAGATTAAGGCGCGAAGTGCTACAGAAGTTAGACACCAAGAGGAAAAAGAAATCTTGTGAGAGACATCGTGATATTACCAATGATTCAAAGTTGGATGCAACCTTGAAATCTGAAATCTCACATCATCAGCACTCAAGGAAGCAATCCAAAGATAATCTTGATCTGGATAAGATAATTGAAGAGTTTTGTCATCTCAAAAGTGTTTGTTCCATGATGCAAAGCAATGATGAAGAAGCAGAAGTCCATGCAGAATCAAACCAGAAGCATGCTATTTCTGAAGACAATGCAAGAGATGCAATTCGTGAATTTGTGAATCAGATGATATTGAATGGCAAAGATCTGGCAGAAGCTAGAAAATTCCTTAGCTCCCATGAATTAGTGGAAGCACTTCAGCTTTTAAGTTCAGATAAGGAATTGTTTCTTACATTTCTACAAAACCCAAATTCATTTATATTGAAATGTGTTCAAGAGTTTGGGAATTCTCAGGGGGACAATGACAAAGAACATAGGTGTGTTACTGGTTCCAACTTCTCCGAACAAGATCATGGCAATCTGGAACAAACTAGGGAGATTGTCAACCACAAAAGGCATAACTTTTTCAGGAAAAAGGTGAAGCCTCAATCAAAAAGTTCAACAGATGAAAATGGGAATACTGACTTTTCAAATAGAATTGTTATTCTGAAGCCTGGTTCTGTGGGCTTGCAAAATTCTGAAACTGGAAACAACCTTGCCTCATCCATAGGTTCTCATGATACTGTCAAATACAATGGTCCTTCTGTTAGAGGTAGTTCACATTTCTCTCTTACAGAGATAAAAAAGAAATTAAAGCATGCTATGGGAAGGGAGAAGCATGGAAACCTGGAAAGGATCTCAAGAAAGCACCCTGCTGAATGTCAAAATAAGGGGCTTAGCAGCAAAGCCTTTGGTAAAGACAATGTTGGAATGAGATCTCCTAACAAAGACCATTTCTTCATTGAAAAAATTGCAAGACCTACCACTGGTGTTATGAAAGGAGACAAGACTGGTAAAAATAAAGATCCTGAATTGATTGTAGAACATGAAAAGGGTATTTATCCCAAACAAGGGGTTTCTAACTTATATATTGAGGCTAAGAAACATCTGTGTGAGATGGTAGGTAATGGAGATGAGAACATAGACTTGTCAAGTAGGCAGATTTCCAAAACCCTTGGAAGAATACTATCTCTTCCTGAGTATAACTTTTCTCCCCTTGGCAGTCCTGGAAGGGATTGGGAGCATCATTTTGTGACTGCACAGAAAAGGTTTTCCACTTCAGATAAAACTCGGGAGCCTAATAAGGATACTTTGTCTCCTAAGCAAGCAACCTTTGTTGGTCATTTGGATCAAGAAACAGACAATCCAGAGAAGCAGTCAAGCATATGTGATGAAAGCTCTAACAATAAAGTACAAGAAATTAAGTCAGACCCTAATTTCTCAGATGACCTTAGTCATGTCAATAGAGTGGAGAACTACTGTCCTGATAGAGATGAGATAGTTATTGAAGGTGATGTAGAATATGTAAAAGAGATAAATGTTTTGGAATCATCCTCAGAACCAGTTGGCCTCAGTGCAGGAAAGGAACACCAAAACTATGGCATCTCAGAAAATCCTGATAATGCAAGCTGTTCACAATGTTTGAAGGAGGATGTAACAGAAGAAAATCAACCATCATCTCCACTTTCGTCCCCCTCTCACTCTTCCATCAATAAGAAAAATAAAGAGATAGAAAGTGTTACAGATGTATCTGGGCGGCCAAGTCCGGTGTCTGTTCTTGATACTCCATTCTCAGAGGATGATGTCAGCCCTGGGTACTCCAGACTTCAACCTGTTGAAGTACCAGTACGGCCACTACATATTCAATTTGAAGAACAGGATTCTTCACCTGTAAATCAAATCAATAGAGCAAAATATTGCTTCAAAGAAAGTGAATTGTTATACAACTACATTAAAGCAGTCTTGCAAGCCTCTGGATTGACTAAAGATCAATTGTTGATGAAATGCCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTCATCAAACCAGCTTTGCCATGATCAGAAGCTTCTATATGACTGTATCAATGAGGTTCTCATGGAGGTTTGTTGCAATTACTTTGGAGCCTTACCTTGTGTATCATTTGTAAGTCCTAGCATAAGGCTAACTCCAAATATGAAAAGGGTTATTCTCAAGGTCTGGGAAGGAGTGTGCTTGCATTTTCTTCCTTTGCCCCCACCTCACACATTGGACAAAATTATTAGGAAAGACATGGAAAACAGTGGATCATGGATGGACCTTCGATTTGAAGCTGAAACAGTTGGTTTTGAATTAGGTGAAGCCATTCTAGCAGAGCTGATGGAAGATACAGTACTCAGCTGTGTAGGCAAAAATCTAGAAAGTGAATGTTCTGAGCTTCAATTTGAGGATAAGGACAACAAGAACAGCACAAATGTGTAA 2853 0.3915 MAKKSQRRPVRYERDKSGCMWGFISMFDFRHGHTTRKLIADKRRSSKHAVGAVHSKNKIEMLSNMDEVCQGSFDNGESKRSTVRTTANKPSVKKLIEEEMFTDQNAIKDTNSAEVESKDSRLRREVLQKLDTKRKKKSCERHRDITNDSKLDATLKSEISHHQHSRKQSKDNLDLDKIIEEFCHLKSVCSMMQSNDEEAEVHAESNQKHAISEDNARDAIREFVNQMILNGKDLAEARKFLSSHELVEALQLLSSDKELFLTFLQNPNSFILKCVQEFGNSQGDNDKEHRCVTGSNFSEQDHGNLEQTREIVNHKRHNFFRKKVKPQSKSSTDENGNTDFSNRIVILKPGSVGLQNSETGNNLASSIGSHDTVKYNGPSVRGSSHFSLTEIKKKLKHAMGREKHGNLERISRKHPAECQNKGLSSKAFGKDNVGMRSPNKDHFFIEKIARPTTGVMKGDKTGKNKDPELIVEHEKGIYPKQGVSNLYIEAKKHLCEMVGNGDENIDLSSRQISKTLGRILSLPEYNFSPLGSPGRDWEHHFVTAQKRFSTSDKTREPNKDTLSPKQATFVGHLDQETDNPEKQSSICDESSNNKVQEIKSDPNFSDDLSHVNRVENYCPDRDEIVIEGDVEYVKEINVLESSSEPVGLSAGKEHQNYGISENPDNASCSQCLKEDVTEENQPSSPLSSPSHSSINKKNKEIESVTDVSGRPSPVSVLDTPFSEDDVSPGYSRLQPVEVPVRPLHIQFEEQDSSPVNQINRAKYCFKESELLYNYIKAVLQASGLTKDQLLMKCLSSDKILDPSLFDQVEFSSNQLCHDQKLLYDCINEVLMEVCCNYFGALPCVSFVSPSIRLTPNMKRVILKVWEGVCLHFLPLPPPHTLDKIIRKDMENSGSWMDLRFEAETVGFELGEAILAELMEDTVLSCVGKNLESECSELQFEDKDNKNSTNV. 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11099 950 MobiDBLite consensus disorder prediction 644 729 - -
Seca3g11099 950 MobiDBLite consensus disorder prediction 547 591 - -
Seca3g11099 950 Pfam Domain of unknown function (DUF4378) 772 920 IPR025486 -
Seca3g11099 950 MobiDBLite consensus disorder prediction 655 694 - -
Seca3g11099 950 Pfam Protein of unknown function (DUF3741) 225 269 IPR022212 -
Seca3g11099 950 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11099 Seca-Chr3 258148037 258154260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11099 1 908 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 34.453 1.01e-121 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11099 - - lja:Lj3g3v2330870.1 1407.89