Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11092 ATGGCATCTGGGAGTCCAAAGCATGACAAGAATCTAAGCACACAGCTAGCTGTTGCAGTCAGAAGTATTCAGTGGAGCTATGGGATTTTCTGGGCACTTTCAACCACTCAACAAAGCAGAGTACTGGAATGGAGGGATGGGTACTATAATGGAGACATTAAGACAAGGAAGACAGTCCAAACAATGGAAACAAAGGCAGATAAAATAGGCCTTCAGAGGAGTGAACAACTGAAAGAACTATACAAGTTTCTTCTTGTAGGTGAAGCTGACCCTCAAACTAAAAGGCCTTCTGCTGCATTATCTCCAGAGGACCTTTCAGATTCTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTATTTTACCCCAACCAGAGTATGCCTGGAAGAGCATTAGAAACTGGTGAAACAGTTTGGTTATGCAATGCTCAACATGCTGATAGTAAAGTTTTCTCTCGTTCTTTACTAGCAAAGAGTGCGTCAATTCAGACTGTGGTGTGTTTTCCTTATCTGGGCGGCGTTATTGAGATTGGCACAACTGAACTGGTCTCTGAGGATCATAATCTCATTCAACATGTAAAGGCATGCTTCTTAGAAATCTCAAAGCCTATATGCTCTGATAAATCTTCCCCTGCCCATAATAAACCACATGATGACAAATATCCAGCATGCACTAAGGGTGACCACGGGGTGTTTGATACAATGGCTTTGGAGAACTCATGTTCCCTTGTAGAAGAAATCAAACTTGATCAATTTCCTGTCAAGGAATTACAAGATGATGATAACAATGAGCACTGTGACATGGATGGATGCCGTATGGATGAATCCATGTTAGAGGGCATCAATGGTGTGTCTTCTCAAGTTCATTTTGTGAATGATGCATTAATCAATGGTGCCCCAGATTCCCTGAGTTCTTGTGATTGTATGTCTGAAGCTTCTGAGAACCATGGTAAGGATTCTAGCCAAGTTCAACAAAGGGAGCTTCAAGACCACAATCAATCAAAACATAACTCATTGGATATTGGAGCTGATGAAGACTTGTACTACTCAAGAACTCTTTGTACTATTCTGGGAAATTCATCAGCTTTTAGACCACATCCAAATGGTGGTAACTCAAATTTCAAATCTAGTTTTGTGAAGTGGAAGAAAGGAGGGATTTCTGAAAGGAAGAGGCCAAGGTTTCCCCAAAGCATGTTAAAGAAGACTTTGTTTAATGTACCTTTTATGCACACAAGTTACTCCTCTCTCAAGTCACAAAAGGAAAATGAATGGACTAGTAAATTGGAAAATGATGATGATTTCATGCCAAATATCTTTGATAATGAAAGAGAAACTAGAAACTTTCAGGTTCGCAGATCTGTGGCTCCTTCTTCCTTAAGTGAGGTGGAGAAGATTTCAATTCTTGGGGACACAATTAAGTACTTAAAAGAGCTTGAGTCTAGAGTGGAAGAACTAGAATCTTACATGGACATTGCAGATTCTGAAGCAAGAACCAGAAGAAAATGCCCTGATGTGCTAGAGCAGATATCAGATAACTATGGTGCCAGAAAGATTTACATGGGAATGAAACCTATTAGGATAAATAAGAGGAAGGGTTGTGATATTGATGAGATGGACACAGAGCTAGACAGAATTGTTTCTGAAGAAGCTAAGAAAATGGATGTGAAAGTCAACATGAAGGAGCAGGAGGTTCTAATTGAGATGAAATGTCCTTACAGGGAAAACATATTGTATGATATCATGAATGCCATAAACAATCTGCATTTAGATGCACACACAGTTGAATCATCAACAATTGATGGTGTTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACTGCACCAATGGGGATGATCAAAGAAGCACTCTGGAAAGTATCTGGAACTGCTTGA 1899 0.3986 MASGSPKHDKNLSTQLAVAVRSIQWSYGIFWALSTTQQSRVLEWRDGYYNGDIKTRKTVQTMETKADKIGLQRSEQLKELYKFLLVGEADPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQSMPGRALETGETVWLCNAQHADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVSEDHNLIQHVKACFLEISKPICSDKSSPAHNKPHDDKYPACTKGDHGVFDTMALENSCSLVEEIKLDQFPVKELQDDDNNEHCDMDGCRMDESMLEGINGVSSQVHFVNDALINGAPDSLSSCDCMSEASENHGKDSSQVQQRELQDHNQSKHNSLDIGADEDLYYSRTLCTILGNSSAFRPHPNGGNSNFKSSFVKWKKGGISERKRPRFPQSMLKKTLFNVPFMHTSYSSLKSQKENEWTSKLENDDDFMPNIFDNERETRNFQVRRSVAPSSLSEVEKISILGDTIKYLKELESRVEELESYMDIADSEARTRRKCPDVLEQISDNYGARKIYMGMKPIRINKRKGCDIDEMDTELDRIVSEEAKKMDVKVNMKEQEVLIEMKCPYRENILYDIMNAINNLHLDAHTVESSTIDGVLTLTLKSKFRGAATAPMGMIKEALWKVSGTA. 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11092 632 Coils Coil 474 494 - -
Seca3g11092 632 MobiDBLite consensus disorder prediction 306 336 - -
Seca3g11092 632 MobiDBLite consensus disorder prediction 319 336 - -
Seca3g11092 632 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 196 IPR025610 -
Seca3g11092 632 PANTHER TRANSCRIPTION FACTOR TT8 5 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11092 Seca-Chr3 258018885 258026629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11092 1 629 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 40.185 4.67e-133 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11092 - - gmx:100783746 944.495