Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11072 ATGTCACCTCTTCCTGATCACGTGGTAATTGGAGGTGGTCAGGATGCATCAGCGGTTACAACTACAGATCATCGTGCTGGCAAATTTGAAGCCAAATTCTTTGATAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGGCATTTTGGACCGATTAATGCACTCGCCTTTAACCCTGATGGAAAAAGGTGTATTCTTTGTTCTTCACCTCTTTTTGTGTTGCATTATCATAGATACTGGTTCAGATATTACAAAAAATGA 261 0.3985 MSPLPDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKRCILCSSPLFVLHYHRYWFRYYKK. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11072 86 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 66 - -
Seca3g11072 86 Gene3D - 1 83 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11072 Seca-Chr3 257838740 257840214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11072 1 62 Eukaryotic Initiation Factors Gene Family AT2G46290 90.323 1.24e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11072 K03246 - csin:114266880 130.568