Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11071 ATGAGGTTTTGCTATCAACTATTTGACGCATCACTCAAGACAATCCCAGATAGCAGCGAGGTAGCGGTTCTAGTGATTTCATCGCGCATTGGAAGAAGGATTGAAGAAACATACAATTTGGAAGAAGGATTGAAGAAACTTACGATTTGTAAGGGGTCTGCGATTTGGCTATTATTGATTGATTTTCGAAAGCTTGTGTTGTATCCGCCGGAATGTTCTTCCAACAGGTTTAATGAAGCAAATGATTTTCTAGTCAGGGATGATGGTGACAATGCATTTCATTACGACTCTCGTCAATTTGTAATTGGGGTGGATTCTGAGGCTGATTTTGTTGACCTTAATCCTGACTTGTTATCTGAGGAAAACTTGAAGAATTTCAATTTTCCTAATCTGGATGTTGCTTTTAATTTTTACAATAATTGGTATGGAAAAATGAAGGGTTTTTCAGCACGAAAGGGCAAAGACCGCAAAAATGCAATGGAAGAAATTATTGAGAAGACGTATCTATGCCATAGGGAAGGAAAGAGACCAATTAATACGAATGAAAAGACGGGGAAGAAAAAACGTGAAGCAAAGCCTGAGACTAGGTGTTTATGTCCTGCAAAAATGAAGGTTCGATTAGATGTACATTCTGGCCGTTGGAACGTGATCAAGTTTTGTGATGCCCATAATCTTGAAATGCTAAACCCCAAATACACAGGGATGCTACCGGCTCATAGGAAATTGAGTGAAGCTGATATCTTGGAGATGAATAACATGCGGAATGCAGGTATTACTACACCTCAAATTTATGGGTCATTTGCCAGCCAATCTGGTGGGTACAACAATGTTGATTTTCGGAAAAGAGATCTTTACAATTAG 861 0.3891 MRFCYQLFDASLKTIPDSSEVAVLVISSRIGRRIEETYNLEEGLKKLTICKGSAIWLLLIDFRKLVLYPPECSSNRFNEANDFLVRDDGDNAFHYDSRQFVIGVDSEADFVDLNPDLLSEENLKNFNFPNLDVAFNFYNNWYGKMKGFSARKGKDRKNAMEEIIEKTYLCHREGKRPINTNEKTGKKKREAKPETRCLCPAKMKVRLDVHSGRWNVIKFCDAHNLEMLNPKYTGMLPAHRKLSEADILEMNNMRNAGITTPQIYGSFASQSGGYNNVDFRKRDLYN. 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11071 286 Pfam FAR1 DNA-binding domain 136 227 IPR004330 -
Seca3g11071 286 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 118 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11071 Seca-Chr3 257818248 257820916 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g11071 FAR1 2.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11071 - - mtr:112417123 174.481