Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11060 ATGGTTTGGATGATTTGGATAGCAATTTTTGTAGCTTCTCTTACTTATCTGTGGCTATGGAGAACCAACAAGAATGCAAAGAGATTGCCTCCTGGTCCAAAAGGATTGCCAATTTTGGGGAGCCTTCACAAATTGGGTGCAAATCCTCATCGTGATCTGCATCAACTTGCTCAAAAACATGGACCTATCATGTACTTGCGCTTAGGTTTTGTGCCAACCATAGTTGTTTCTTCACCACAAGCTGCTGAAATGTTCCTCAAGACCCATGACCTTGTGTTTGCTAGTAGACCACCACATGAGTCTGCAAAATACATCGCTTGGGAACAGAGGAACTTGACCTTTGCTGCATATGGTTCTTATTGGCGCAACATGCGTAAGATGTGCACTTTGGAATTGCTAAGCCAAACCAAAATTAACTCCTTCAAACCCATCAGGGAAGAAGAGCTTGACTTGTTTATCAAGCTTGTAAGAGAGGCAGCCAATGATGGAGGTGCTATTGATCTCAGTGCCAAAATTTCAACACTCACAGCAGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTACATGGACCAGGACTTGGATGAGAAAGGGTTCAAAAGTGTGATGCAAGAGGGAATGCATTTAGCAGCAACACCTAACATTGGTGATTACATTCCTTGCATTGGTGCACTTGACCTTCAAGGGCTAACTAAGCGCATGAAGGTAGTGCACAAAATATTTGATGACTTCTTTGAGAAAATTATTGATGAGCATATGCAATCAGACAACAAAGAAAATAAGATCAAGGATTTTGTGGATGTCATGTTGGGATTTGTTGGTACTGAAGAATCTGAGTACAGGATTGAACGGCCTAATATCAAAGCCATATTGTTGTTCTTTTCATTTTTTGCACAGGATATGCTGGCGGGTTCAATGGATACTTCTGCTACAGCAATTGAGTGGACAATTTCGGAGGTACTCAAGCATCCACAAGTGATGAAGAAAGTCCAAATGGAGTTGGAAAATGTGGTGGGTATGAAGAGGAAGGTGGAGGAATTTGACTTGGACAAGTTGGAGTATTTGGATATGGTTATCAAGGAAAGCTTAAGGATTCATCCAGTGGGACCATTACTAATACCACACCAATCTGTGGAAAATTGCATGGTTGGAGAATATTTCATACCAAAAAACTCAAGGGTGATAGTAAATGCATGGGCAATAATGAGAGACCCAAGTGCTTGGACTGAGGCAGAGAAGTTTTGGCCTGAGAGATTTGAAGGAAGTAACATAGATGTGAGAGGGCGTGATTTTGAGCTTATACCATTTGGTTCTGGTAGAAGGGGATGTCCTGGATTGCAATTGGGCCTAACAGTGGTTCGTTTAGTGGTAGCCCAGCTTGTCCATTGCTTTGATTGGAAGCTACCCAATGACATGAAACCAACAGATTTGGACATGACTGAGGAGTTTGGCCTTACAATGCCCAGGGCCAAGCATCTTGTTGCAATTCCTACTTATCGTCTTCATAATGAAATGGATTAA 1521 0.4195 MVWMIWIAIFVASLTYLWLWRTNKNAKRLPPGPKGLPILGSLHKLGANPHRDLHQLAQKHGPIMYLRLGFVPTIVVSSPQAAEMFLKTHDLVFASRPPHESAKYIAWEQRNLTFAAYGSYWRNMRKMCTLELLSQTKINSFKPIREEELDLFIKLVREAANDGGAIDLSAKISTLTADMSCRMVLGKKYMDQDLDEKGFKSVMQEGMHLAATPNIGDYIPCIGALDLQGLTKRMKVVHKIFDDFFEKIIDEHMQSDNKENKIKDFVDVMLGFVGTEESEYRIERPNIKAILLFFSFFAQDMLAGSMDTSATAIEWTISEVLKHPQVMKKVQMELENVVGMKRKVEEFDLDKLEYLDMVIKESLRIHPVGPLLIPHQSVENCMVGEYFIPKNSRVIVNAWAIMRDPSAWTEAEKFWPERFEGSNIDVRGRDFELIPFGSGRRGCPGLQLGLTVVRLVVAQLVHCFDWKLPNDMKPTDLDMTEEFGLTMPRAKHLVAIPTYRLHNEMD. 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11060 506 CDD CYP71-like 59 493 - -
Seca3g11060 506 Pfam Cytochrome P450 30 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Seca3g11060 506 FunFam Cytochrome P450 83B1 17 496 - -
Seca3g11060 506 Gene3D Cytochrome P450 18 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 SUPERFAMILY Cytochrome P450 30 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11060 506 PANTHER CYTOCHROME P450 93A3-LIKE 3 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11060 Seca-Chr3 257731794 257733528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11060 5 501 Cytochrome P450 AT5G07990 40.509 8.00e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11060 K20562 - gmx:100809526 849.351