Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11037 ATGGATATAGCTTTTAGCTTGCCACGGTCAAAAGTGGTGTTTGATGGTTTTGATTCTTGCAATGTGTTTGGAGGGAGAGGTTTTGGTTGTGCTTTTCTCGGAAACTCGAGGACTATTTTGAAAGCTCGTTTTAGTGGGATGAACAAGATTGGTAGTAGGAGTAATTCAAGAGTGGTTTGTGTAGGAGAGTTTAGAGTTTCAATTGTGAAGAGAAGTTTGTCTTGTAAGAGCAATAACCTTTTTAGGGGAAATAGGGAAATATGGTCAAAGTGTCAGGGTGATGATTCTTTAGCATATGTGAATGGCAATGGCCGGAATGTTGGTAATGTGGAAGGTAAGGATGGGGACTCTGATTTGGGGTCCATTTCCAGTGTTGAATTGAGTGAACCTTTGGGAGGAGGAGGAGAAGAAGGGCTAGGAGGGAAGAAAGAAGTTGAGGGTGAAGTAGAAGTAGATGTACAAAGTGTTGATGAATTGAAAGAATTGTTGCAGAAGGCCTTGAAAGAACTAGAAGATGCTCGAGTAAACAGTGTCATATTTGAGGAAAAGGTTAAAAAGATATCAGAGACTGCAATTTCTTTGCAGGATGAAGCAACGGGTGCTTGGAATGATGTCAATTCTACCCTTGATATCATCCAAGAAATTGTGAATGAAGAATTTGTTGCTAAAGAAGCTGTTCAAAATGCAACGATGGCTCTTTCTTTAGCTGAGGCAAGGCTCCAAGTAGCCGTTGAGTCTTTGGAGGTTACAAAAGAAGTTTACAATTCCCCGCAAGGTTCTAATGAGAGTAATGGTGATAACGATATAGTGCAAGAGGAGAAAGCACTTGTGGTTGCTCAGGAAGATATTAAGGAATGTCAGGCAAATTTAGAAAACTGTGAGGCAGAGTTGAGGCGCTTGCAAAGTAGAAAGGAGGAGTTGCAGAATGAAGTGAACAAGTTGCATGAAATTGCAGAAAAGTCACAGCTGAATGCAGTGAAAGCAGAGGAGGATGTCACAAACATAATGCTTCTAGCGGAGCAAGCTGTTGCCTTTGAACTTGAGGCTGCACAGCGTTTGAATGATGCAGAGATTGCGTTACTGAGAGCAGAAAAGTCTGCCTCTAGTGTTAATGCTGATATCACAGACACTCAACAAGTACAAGATGTTGTGGCTGTTCCTGACGAGGAGAAAGTGGTTCAACATTTTTCTGGTGATGATGCTGTTAAAAGAGAGCTTGATTTCTCAAGTGATGATGAGTCTCTGCTTACCACACGATCACCAGAGTCACCATCTAATGAAACCAGCCAAATTTTGGAAGATATAACACAGTCTGATTATCTGAGTGATCATGAGAATGGACACTTAAACTTAGACTCTTCTAAAGAAGCTGAAATTGATGTTGAGAAGTCTAAGAATGTAGTTCAAACAAAAAAACAGGAAACACAGAAAGATTTGACTAGAGATAATTCACCATTTGCTCCCAAGACGTTATCGAAGAAGTCTTCCCGATTTTTTCCTGCATCATTTTTCTCTTTTACAGCAGATGAGACTGATTATACACCAGCATCAGTTTTCAATGGTCTTGTGGATTCTGCACAGAAACAGTTACCCAAGCTGGTTGTTGGGTTATTGTTAATTGGAACAGGGGTTGCCTTCTATGCCAATAGAGCAGAGAGGAGTTCTCAGCTGCTTCAGCAGCCACAAGTCATTACAACCACTGTTGAAGAAGTTTCCTCAAGTGAAAAGCCTCTGGTTAGACATCTTCAGAACCTCCCTAAGAGAATTAAGAAAATTATTACGTCATTACCTGATCAAGAGGTGAATGATGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATTCCTGGAGGCAGTCCCGTTCTTGGTTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATTCGCCATGTTCACGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGCTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTCAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGTTGACTGCTGTAGCAATTGGCTTGGTAGCTCATTATGTTTGTGGCCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCGTCAACTGCTGTTGTCCTGCAGGTGTTACAGGAGAGAGGTGAGAGCACATCACGGCATGGTCGGGGTACATTTTCGGTTTTACTTTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTCATACCTCTCATTTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCCATTGCAGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGTGGACGATTGCTTCTTCGACCCATATACAAGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCAGGACTTTCCATGGCACTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCCTACAGGTTGAATCTGATATTGCTCCATATCGCGGCCTTCTATTGGGCCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTATTTCAAACTTTCCAATCATTACAGGGACATTGGGACTCTTGATATGTGGCAAGACTATCTTGGTTTCTCTGATTGGCAGAATTTTTGGTATTTCACTCATTTCTGCCATTAGAGTTGGTCTTCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTTCTTGTTGTGGGAATTTCAATGGCCCTGACGCCATGGCTAGCTGAAGGAGGCCAGCTAATTGCTTCTCGTTTTGAGCTGCATGATGTTCGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATTATTATTTGTGGATTTGGGCGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGACTTATTCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGGCTGTTGGGCGTTCCCTGGATCTCCCCGTGTACTTTGGGGATGCTGGTAGTCGAGAGGTCCTACATAAAGTTGGGGCTGAAAGGGCAAGTGCTGCAGCAGTAACTCTAGATTCCCCTGGTGCAAATTATAGAACAGTTTGGGCTCTAAGCAAGCACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATATTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACCGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCAGTGCTTGCACAGGTGACTATCATATATATTGACTTAATGAATAAACTTTTTATGTCCTAG 3489 0.4236 MDIAFSLPRSKVVFDGFDSCNVFGGRGFGCAFLGNSRTILKARFSGMNKIGSRSNSRVVCVGEFRVSIVKRSLSCKSNNLFRGNREIWSKCQGDDSLAYVNGNGRNVGNVEGKDGDSDLGSISSVELSEPLGGGGEEGLGGKKEVEGEVEVDVQSVDELKELLQKALKELEDARVNSVIFEEKVKKISETAISLQDEATGAWNDVNSTLDIIQEIVNEEFVAKEAVQNATMALSLAEARLQVAVESLEVTKEVYNSPQGSNESNGDNDIVQEEKALVVAQEDIKECQANLENCEAELRRLQSRKEELQNEVNKLHEIAEKSQLNAVKAEEDVTNIMLLAEQAVAFELEAAQRLNDAEIALLRAEKSASSVNADITDTQQVQDVVAVPDEEKVVQHFSGDDAVKRELDFSSDDESLLTTRSPESPSNETSQILEDITQSDYLSDHENGHLNLDSSKEAEIDVEKSKNVVQTKKQETQKDLTRDNSPFAPKTLSKKSSRFFPASFFSFTADETDYTPASVFNGLVDSAQKQLPKLVVGLLLIGTGVAFYANRAERSSQLLQQPQVITTTVEEVSSSEKPLVRHLQNLPKRIKKIITSLPDQEVNDEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLLTAVAIGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRGTFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLISNFPIITGTLGLLICGKTILVSLIGRIFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAEGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRSLDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVTIIYIDLMNKLFMS. 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11037 1162 MobiDBLite consensus disorder prediction 442 487 - -
Seca3g11037 1162 Gene3D - 604 990 IPR038770 -
Seca3g11037 1162 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1013 1149 IPR036291 -
Seca3g11037 1162 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 191 1150 - -
Seca3g11037 1162 Coils Coil 153 183 - -
Seca3g11037 1162 ProSiteProfiles RCK N-terminal domain profile. 1016 1138 IPR003148 GO:0006813
Seca3g11037 1162 MobiDBLite consensus disorder prediction 442 479 - -
Seca3g11037 1162 Gene3D - 1012 1155 - -
Seca3g11037 1162 FunFam K(+) efflux antiporter 2 chloroplastic 1012 1159 - -
Seca3g11037 1162 Pfam Sodium/hydrogen exchanger family 614 984 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca3g11037 1162 MobiDBLite consensus disorder prediction 413 430 - -
Seca3g11037 1162 Coils Coil 269 324 - -
Seca3g11037 1162 FunFam K(+) efflux antiporter 2 chloroplastic 604 990 - -
Seca3g11037 1162 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 615 895 IPR004771 GO:0006812|GO:0008324|GO:0016020
Seca3g11037 1162 MobiDBLite consensus disorder prediction 403 430 - -
Seca3g11037 1162 Pfam TrkA-N domain 1017 1130 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11037 Seca-Chr3 257439358 257452400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11037 1 1137 Inorganic Solute Cotransporters AT4G00630 66.121 0.0 1360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11037 K03455 - gmx:100791174 1732.61