Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10976 ATGAGCGTGGAGATGCAGCTAAGAAGGTTCAATTCAATGGAACGGAGGCCTAGAATGCTGAAGGAGTTTCTGAGCGAGAATCTAAGTTCATGTTCCTCAAGCGGGTTCAAGTCATTTCCAAGAAAACCACCAAACGGCGTCGTTTCACCTTCCCGTAACAGCATGCACAGTCTCATAGAAATAGAACTCAATTCGTATAATTCATCATCAAAATCGACCTTCCAGACGTTGATGAACACGATAAGGAGCATCTCTTTCTTCAACTCGGTGAGAAAATCACCCTCCGTGCTTTCTCTACCGCGGAGCCTCTCAAGGAAGCTATCATCATCAAAGAGGAGAAGAAACCAAGGATGCAAAGAAAGCAGCGAAATCAAAATCAGCACCGTCAAGATCAAGGACATCATACGGTGGAAATCGTTCCGAGACCTAGTGGAGGAGCATAACCTTCACCACCAACAACAACAACCTTCTCTTCCGTCACCGCCACTATCACCGTCGGATTTTCGCCGTTGCACGACGGAATCTACCTTCACAACTACCACCGTCACCACTTGTAGTAGCAGTAGTTGTGGCTCTAGCTGGAGTGACGGTGATTTTTTTACCGCTACGTGGGAAGCACAAAACGACAGCGTTGAAGCGGGTAAAAAATTGCCGTTTTCACCCTTTTTTGTCGGCAAGGATTCGGTGGCACCGTACGCGGCGGCCGTGGGGGCCAAGGAGGTTTTAACTTGTCAAGAAGATGAACAACACAGTCCAGTTTCAGTTCTTCAGGTTGGAGAAGATGAATTCTCACTTTTTGATCAAAGCCTTGCCAATATTGAAAGGAGAAAACAAAAATTCATACAAACCGTTCAGAAATTCGAGAGTCTTGCAAAATTTGACCTTGCAGACTTAGACCAATGTCTCTCATTGGATGAGAACTCTTGTTATGATGAAGATCATGAAGATGATGATGACAAGGATAAAAAAGTTGAAGAACAAGATTGGGTTGAGGAAAGGGCAAAGAAGCTACTACATTGTATTAAAGCAACAGGTTCATCAGTGCAGAAATGTAAGGACAACTTGGATACAGTTCTGTTGGATTTTTTCAGGGAAGAACTAACTGGAAGTATAAACCAAGATAGGAATGGTGAGGAGTTTGAGTGGGAGATATTGGGAATAGCTGAGGATTGGATAAATGGGTCATTTACTTATGATATAGGGCATGTGGATAAGGATGCTTATATCAAGGACATGGATAGGAGAGTTCCATGGAACAAGTTTGAGGAGGAGCAAGGAGAATTGGTATTGGAGATTGAGACAGCTATATTGCATAGTTTGGTTGCTGATCTTCTGGACCTGGATGGTTAA 1350 0.4363 MSVEMQLRRFNSMERRPRMLKEFLSENLSSCSSSGFKSFPRKPPNGVVSPSRNSMHSLIEIELNSYNSSSKSTFQTLMNTIRSISFFNSVRKSPSVLSLPRSLSRKLSSSKRRRNQGCKESSEIKISTVKIKDIIRWKSFRDLVEEHNLHHQQQQPSLPSPPLSPSDFRRCTTESTFTTTTVTTCSSSSCGSSWSDGDFFTATWEAQNDSVEAGKKLPFSPFFVGKDSVAPYAAAVGAKEVLTCQEDEQHSPVSVLQVGEDEFSLFDQSLANIERRKQKFIQTVQKFESLAKFDLADLDQCLSLDENSCYDEDHEDDDDKDKKVEEQDWVEERAKKLLHCIKATGSSVQKCKDNLDTVLLDFFREELTGSINQDRNGEEFEWEILGIAEDWINGSFTYDIGHVDKDAYIKDMDRRVPWNKFEEEQGELVLEIETAILHSLVADLLDLDG. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10976 449 Coils Coil 270 290 - -
Seca3g10976 449 PANTHER OS04G0572500 PROTEIN 5 445 - -
Seca3g10976 449 MobiDBLite consensus disorder prediction 101 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10976 Seca-Chr3 256619997 256622993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10976 13 445 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 30.435 2.39e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10976 - - gmx:102661341 442.58