Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10967 ATGGCAACTAGACTTCAGTTTGAAAATAATTGTGAAGTTGGAGTGTGTTCTAAACTTACAAATGCCTACTGTTTGGTTGCCATTGGAGGTTCTGAAAACTTTTACAGTGTATTTGAATCCGAGTTAGCAGATGTTATCCCTGTGGTTAAGACATCCATTGACAGTACTCGAGTTATTGGCTGTCTTTGTGCTGGAAACAAGAATGGGCTTCTCTTGCCCTATACCACCACAGACCAAGAACTTCAACATTTAAGAAATAGTCTACCTGATCAAGTTGTCGTTCAGCGAATTAATGAAAGGTTATCTGCTCTGGGAAATTGTATAGCATGTAATGACCATGTGGCGCTCACACACATTGATCTTGACCGGGATACTGAAGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACCATTGCTGGTAATACTGTTGCTGGTAGCTACTGTGCTTTCTCCAACAGAGGTGGTTTGGTGAGTAAAACATTTTCTCCTTGA 504 0.4087 MATRLQFENNCEVGVCSKLTNAYCLVAIGGSENFYSVFESELADVIPVVKTSIDSTRVIGCLCAGNKNGLLLPYTTTDQELQHLRNSLPDQVVVQRINERLSALGNCIACNDHVALTHIDLDRDTEEMIADVLGVEVFRQTIAGNTVAGSYCAFSNRGGLVSKTFSP. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10967 167 Hamap Translation initiation factor 6 [eif6]. 1 167 IPR002769 GO:0042256|GO:0043022
Seca3g10967 167 SMART eIF6neu2 3 165 IPR002769 GO:0042256|GO:0043022
Seca3g10967 167 NCBIfam translation initiation factor IF-6 4 162 IPR002769 GO:0042256|GO:0043022
Seca3g10967 167 Gene3D - 1 167 - -
Seca3g10967 167 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 164 IPR002769 GO:0042256|GO:0043022
Seca3g10967 167 SUPERFAMILY Pentein 1 163 - -
Seca3g10967 167 Pfam eIF-6 family 4 164 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10967 Seca-Chr3 256535200 256538526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10967 1 161 Eukaryotic Initiation Factors Gene Family AT3G55620 86.335 7.24e-103 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10967 K03264 - ming:122066887 295.049