Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10966 ATGGTTGAGGATCTCACAGAGCACCCTGTAATGATCACTTACGGCAACATGATTTTTAGGACACTCCTACTATTCCTGGCCTTTATGGTGACAAATTCAGTGGCTCTCATTGACAAACAGACATATATAATACACATTGACAATGCCAAGATCAGAGCCTCAGTTCATTCCCAAGACAGTACAAGACCCTGGTTTAAATCAGTCATTGATTTCATCTCTGAAGTTTCACTGGAAAAAGAAGAAGAGATAGCCCCTGAGCTTCTTTATGTTTATGAAACCAATATGTTTGGTTTTGCTGCCCAACTTTCCGATCAACAACTTGAATACTTGAACCAAGTGGATGGTTTCCTTTCAGCCATACCTGATGAGTTATTAGCTCTCCACACAACATACACCCCACATTTTCTTGGCCTACAGAATGGAAGAGGACTTTGGAGTGCTCCTAACTTGGCCTCAGATGTGATCATAGGGGTCCTAGATACTGGGATATGGCCTGAACACATCAGTTTCCAAGACTCAGGTTTGTCCACAGTACCCTCTCGTTGGAAAGGTTCTTGTGAAGAAGGCACCAATTTCTCTGCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGAGTCTTCCTCAAAGGGTATGAAAAGTTTGCTGGAAGAATCAATGAAACTTTGGATTATCGTTCTGCTAGAGACTCACAAGGGCATGGAACACACACAGCATCAACTGCAGCTGGTAATATGGTGAATAATGTCAGCTTTTTAAGCATTGAAAGAGGTTCAGCCAGTGGAATGAGGTACACCTCAAGAATTGCAGCTTATAAAGTATGCTGGCGTTTAGGCTGTGCTAACTCTGATATATTGGCAGCTATGGATCAAGCTGTTGCTGATGGGGTTGACATATTATCACTCTCTTTAGGTGGTGTTGCCAAACCTTATTACAATGATAGTATTGCCATAGCCTCATTTGGAGCAACACAAAGTGGAATTTTTGTTTCTTGTTCTGCAGGAAATTCAGGCCCCTCTATATCAACTGTTGGAAATGTTGCCCCATGGCTCATGACTGTTGCTGCTAGCTACACTGACAGGAGCTTCCCTACAAAAGTGAAGCTTGGGAATGGACAGATTTTTAAAGGGTCATCTTTATATCAGGGCAAGGGAACAACCCAATTGCCTCTTGTGTATGGCAATTCTTCAAAAGCACAAAGGACAGCACAGTATTGCACTAGAGGCTCACTTGATCCAAAATTTGTGCATGGAAAAATAGTTATTTGTGAAAGAGGAATAAATAGTAGAACTGAAAAGGGAGAGGCAGTGAAGATGGCAGGTGGAGCAGGAATGATACTACTCAACTCAGAAAATCAAGGAGAAGAGCTTATTGCTGACTCTCACATTTTGCCAGCCACTGCCATAGGGGCCTCAGCAAGTAAAAAAATTAGAAGCTATATTCACTCAGCAAAAGCACCAACAGCTTCAATTTCCTTCATAGGGACAAAATATGGAGATCCTGCACCAGTTATGGCAGCTTTTTCTTCTAGAGGACCAAGTGCAGTGGGACCAGATGTGATTAAGCCAGATGTGACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCACCCACAACTAGCCCAAGCTTGCTCAAGAGTGACAAAAGAAGTGTACTATTTAACATAGTTTCAGGTACATCAATGTCATGTCCTCATGTTAGTGGCATAGCTGCACTGCTTAAATCTGTGCATAAGGATTGGTCTCCTGCAGCTATCAAATCTTCTCTGATGACTACAGCTTACACATTAAATAATAAAGGTGCTCCAATTGCTGACATTGGCTCAAATAACTCTGCTGCATTTGCTAACCCCTTTGCATTTGGTTCAGGCCATGTTAACCCAGAAAGAGCTTCTGATCCAGGGTTAGTGTATGATATCACCAACAAAGACTACTTAAATTACTTGTGCAGCCTGAACTATACCCCTTCTCAGATTACTTTATTGTCAAAAGGCAAGTTTACATGTACCAAAAATTCAGTTCTCCAAGCTGGTGACTTGAACTACCCTTCATTTGCTGTGATATTTAGCACAAGTGCTCTAAACGCTAGTGTGACATACAAGAGGGTAGTCACAAATGTAGGAAATCCCAAAAGTTCATATGCAGTTAAAGTGGAAGAACCAAAGGGAGTATCAGTGATGGTTGAACCAAGGAGTTTGAGTTTTAGAAAACTGGGTGAGAAATTGAGTTACAATGTGACTTTTGTTGCATATGGAAGAACAATAGCTACTGGTAGTTCATCATTTGGGTCACTTACTTGGGTATCAGGTACATATGTAGTTAGAAGTCCTATAGCATTGATCTGGCTATAG 2349 0.4159 MVEDLTEHPVMITYGNMIFRTLLLFLAFMVTNSVALIDKQTYIIHIDNAKIRASVHSQDSTRPWFKSVIDFISEVSLEKEEEIAPELLYVYETNMFGFAAQLSDQQLEYLNQVDGFLSAIPDELLALHTTYTPHFLGLQNGRGLWSAPNLASDVIIGVLDTGIWPEHISFQDSGLSTVPSRWKGSCEEGTNFSASNCNKKLIGARVFLKGYEKFAGRINETLDYRSARDSQGHGTHTASTAAGNMVNNVSFLSIERGSASGMRYTSRIAAYKVCWRLGCANSDILAAMDQAVADGVDILSLSLGGVAKPYYNDSIAIASFGATQSGIFVSCSAGNSGPSISTVGNVAPWLMTVAASYTDRSFPTKVKLGNGQIFKGSSLYQGKGTTQLPLVYGNSSKAQRTAQYCTRGSLDPKFVHGKIVICERGINSRTEKGEAVKMAGGAGMILLNSENQGEELIADSHILPATAIGASASKKIRSYIHSAKAPTASISFIGTKYGDPAPVMAAFSSRGPSAVGPDVIKPDVTAPGVNILAAWPPTTSPSLLKSDKRSVLFNIVSGTSMSCPHVSGIAALLKSVHKDWSPAAIKSSLMTTAYTLNNKGAPIADIGSNNSAAFANPFAFGSGHVNPERASDPGLVYDITNKDYLNYLCSLNYTPSQITLLSKGKFTCTKNSVLQAGDLNYPSFAVIFSTSALNASVTYKRVVTNVGNPKSSYAVKVEEPKGVSVMVEPRSLSFRKLGEKLSYNVTFVAYGRTIATGSSSFGSLTWVSGTYVVRSPIALIWL. 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10966 782 FunFam Subtilisin-like protease SBT1.5 648 782 - -
Seca3g10966 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Seca3g10966 782 ProSiteProfiles Serine proteases, subtilase domain profile. 130 631 - -
Seca3g10966 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 778 IPR045051 -
Seca3g10966 782 FunFam Subtilisin-like protease SBT1.5 153 370 - -
Seca3g10966 782 CDD PA_subtilisin_like 366 490 - -
Seca3g10966 782 Gene3D - 359 497 - -
Seca3g10966 782 SUPERFAMILY Subtilisin-like 127 635 IPR036852 GO:0004252|GO:0006508
Seca3g10966 782 Gene3D Peptidase S8/S53 domain 153 644 IPR036852 GO:0004252|GO:0006508
Seca3g10966 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 128 IPR037045 -
Seca3g10966 782 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Seca3g10966 782 PRINTS Subtilisin serine protease family (S8) signature 151 170 IPR015500 -
Seca3g10966 782 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Seca3g10966 782 Pfam Subtilase family 152 601 IPR000209 GO:0006508|GO:0008236
Seca3g10966 782 FunFam subtilisin-like protease SBT1.5 359 497 - -
Seca3g10966 782 CDD Peptidases_S8_3 127 594 IPR034197 -
Seca3g10966 782 Pfam PA domain 388 474 IPR003137 -
Seca3g10966 782 Pfam Fibronectin type-III domain 678 778 IPR041469 -
Seca3g10966 782 Pfam Peptidase inhibitor I9 41 127 IPR010259 -
Seca3g10966 782 Gene3D - 648 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10966 Seca-Chr3 256530137 256535132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10966 39 781 Subtilisin-like Serine Gene Family AT1G01900 56.586 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10966 - - gmx:100817581 1312.75