Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10963 ATGGACATACTTGCTGCATTTGAAGCTTCTATACATGATGATGTGGGTGTCATATCCATTTCTGTAGGTGGAGGGAATGCAAATTATGTGCAGGACTGTATAGCCATTGGATCATTTCATGCCATGAGGAAAGGCATAATCATTGTGGCCTCAGTTGGTAATGATGGTCCAACTATGGCAACTGTCACAAATAATGCACCTTGGATTGTAGCAATAGCTGCTAGTGGCATTGATAGGGATTTCCGGAGCACTATAGAGTTGGGGAATGGAAAAATATTTCTGTAA 285 0.414 MDILAAFEASIHDDVGVISISVGGGNANYVQDCIAIGSFHAMRKGIIIVASVGNDGPTMATVTNNAPWIVAIAASGIDRDFRSTIELGNGKIFL. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10963 94 ProSiteProfiles Serine proteases, subtilase domain profile. 1 94 - -
Seca3g10963 94 Pfam Subtilase family 2 78 IPR000209 GO:0006508|GO:0008236
Seca3g10963 94 Gene3D - 78 93 - -
Seca3g10963 94 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 90 IPR045051 -
Seca3g10963 94 Gene3D Peptidase S8/S53 domain 2 77 IPR036852 GO:0004252|GO:0006508
Seca3g10963 94 SUPERFAMILY Subtilisin-like 2 91 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10963 Seca-Chr3 256466704 256466988 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10963 1 93 Subtilisin-like Serine Gene Family AT4G00230 67.742 8.00e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10963 - - ccaj:109800351 151.754