Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10959 ATGCTAATTTCTCAGGCTGTAATAAGTAACATCCCTATCCTTGTGTACATTGTACTATATGTTCAATCTGTGGACTTAACATTTAGTTGCAAGATCATAGGAGCCAAATACTTCAAGATTGATGGAAGGTCTGATCCATCTGACATATTATCTCCCATAGATGTGGATGGTCATGGCACTCACACTGCATCAACAGCAGCAGGCAATCTTGTCCCAAATGCAAGTCTCTTTGGCTTCGCAAAAGGGACTGCTCGGGGTGCAGTGCCTTCAGCCAGGTTGGCAATTTACAAAATCTGCTGGACAAAAGATGGATGTGCTGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCCATTTCTGTAGGTGGAGGGAATGCAAATTATGTGCAGGACTGTATAGCCATTGGAGCATTTCATGCCATGAGGAAAGGCATAATCACTGTGGCCTCAGCTGGTAATGATGGTCCAACTATGGCAACTGTCACAAATAATGCACCTTGGATTGTAACAGTAGCTGCTAGTGGCATTGATAGGGATTTCAGGAGCACTATAGAGTTGGGGAATGGAAAAAATGTTTCTGAAGTTTCTGTAATACTGATAGACTTTAAGGATAGCCTTGCTGTATCTAGCTGA 657 0.4262 MLISQAVISNIPILVYIVLYVQSVDLTFSCKIIGAKYFKIDGRSDPSDILSPIDVDGHGTHTASTAAGNLVPNASLFGFAKGTARGAVPSARLAIYKICWTKDGCADMDILAAFEAAIHDGVDVISISVGGGNANYVQDCIAIGAFHAMRKGIITVASAGNDGPTMATVTNNAPWIVTVAASGIDRDFRSTIELGNGKNVSEVSVILIDFKDSLAVSS. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10959 218 Pfam Subtilase family 54 202 IPR000209 GO:0006508|GO:0008236
Seca3g10959 218 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 201 IPR045051 -
Seca3g10959 218 Gene3D Peptidase S8/S53 domain 29 184 IPR036852 GO:0004252|GO:0006508
Seca3g10959 218 Gene3D - 185 205 - -
Seca3g10959 218 ProSiteProfiles Serine proteases, subtilase domain profile. 1 218 - -
Seca3g10959 218 SUPERFAMILY Subtilisin-like 25 198 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10959 Seca-Chr3 256441936 256443156 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10959 31 211 Subtilisin-like Serine Gene Family AT4G00230 68.508 3.10e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10959 - - ccaj:109800351 310.457