Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10958 ATGTCGACATACTCTGTCTCTAAAAAAAGAAAACTGAAGAAAGTGGATGATGGTGGAAAATCCGTGTCAGAGACAAAGTACGATGTTTTTGTTAGCTTCAGGGGCGAGGACATCCGTGACGGTTTTCTCAGCCACTTGATTAAGGCTTTCCATCGGAAGAATTTAAAAGCCTTTGTAGATGATCAACTTGAAAGGGGAGATGAAATTTGGCCATCACTTGTTGAAAAAATTGAGGGATCATTCATTTCCTTGATCATATTCTCAGCAGATTATGCTTCTTCACGTTGGTGTTTGGAAGAAGTTGTCAAAATACTTGACTGCAGAGACAAGTACCAACAGATCGTAATACCTGTTTTCTACCATGTAGATCCCACATGTGTACAGCATCAAACGGGGACCTATGAAAATTCATTTGCTGAACATGGAAAGAAATATGATTCCACTAAGGTGCAAATTTGGAGAGATGCTTTGAACATCTCCGCTAATCTAGCAGGAATTAAGTCATCTGATGTTCGAAATGATGCTGATCTGGTTGAAGAAGTCGTCAATCTTTTGTTGAAGAGATTGTGTAAATACCCAGTTAACTCAGAAGGACTTGTTCACTCGAAAAGACTTATTGGGATTGACAGACAAATGGCAGATGTAGAAAGGTTGTTACATCACCCTCGTGTTATTGGAATATGGGGTATGGGCGGTATTGGCAAGACAACCATTGCAATTGAAGTATATAACAAACTTCGGTCTAAATATAATGGTTGTTGTTTTTTGCAAAATGTAAGAGAAGAATCATCAAGACATGGAATTATTTCCTTGAAAGAAAAGCTCTTTTCTAAATTAATAGGAGAAGATGTGAAAATTGACACACCAAATGGGTTGTCCAGTGATATCGAGAGAAGGATTAATGGTATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATTCAGACCACCTAGAAAACTTATTAGGTGAAGCTTGTGATATGCTTGGATCAGAAAGTAGAATAATTATAACAACTAGAAATAAGCAAGTGCTTAGTACTGCTTTCAAAGCTTACGATATACACGAGGTTGGAGTGTTGAGTCCCAGTGAAGCACTTGAGCTTTTCAATTTGAATGCCTTTAACCGAAGTCATTTGAAAAAGGAGTATCGTAAGCTATCAAAGAGGGTGGTTCGTTATGCCAGTGGCATTCCATTGGTTCTTAAAGTTTTAGGACGTCTTCTTCATGGAAAAGACAATGAAGTATGGGAAAGTCAGCTAAATAAGCTTGAAAAAATGCCAGACCAACAAGTTTACGATGTAATGAGACTGAGTTATGATGATCTAGATCGCAAAGAGAAAAAGATTTTTTTAGATCTTGCATGTTTCTTCATTGGATCGGGATTAAAAGTGGGTGAAATAAAAAGTTTATTGAGAGATGGTAAAAGCGATAATTCAGTGACTGTTGTGTTTGAAAGGCTAAAAGATAAAGCTCTTGTAACTTTTTCTGAGGATAATTGTGTATCTATGCATGATATCATACGAGAAATGGCTTGGGAGATTGTTCGCCAAGAATCTAGTGAAGACCCTGGAAGCCGTAGTCGATTATGGGATCCTGATGACTGTAGGGAAGTACTGGAAAATGACAAGGGGACTGAGGCCATCAGAAGCATACGCATATATCTTCATTGGATTAATTACCCTCAAGCAACCTTGCCACAAAATTTTTCTGCTGAAAAACTTGTTATATTGAACTTGTCATCATATAGCAAGATAGTAAAACTTTGGGACCGAGTGCAGAATCTCGTGAATTTAAAACAAGTTATACTCAATCGTTGCCTTAACTTGTTAGAGCTGCCAGACTTTTCCAAAGCCACAAATCTTGAAGTACTAGAAGCCCGATATTGTAAGGAGTTGTCAGGGGTGCATTCATCTATATTCTCTCTCAACAAGCTCAATACATTGGATCTTTCTTGGTGCGATAAAATTGCCACAATTACCAGTGATACCCATTTGAGCTCCCTCAGTTATCTCAAGCTTGATTACTGTGATAGTCTAAGGGAATTCTCATTGACATCAGAGAATATGAAAAAACTAGATTTAACTTGGACGAAGGTCAGAGCATTGCCCTCATCATTTGAACGTCAAAGCAAGCTTGAAATCCTATGTCTAAGAGAGAGTCACATTAAGGAGTTACCTTCATGCATGAAGAAACTTACAAGATTGCAATATTTAGACATAAGAAACTGCCGGGAGCTTCAGACAATACCAGAGCTTCCCCCCTCCCTTCAAACTCTCCTTGCTGGAGATGATCATTGGTTCCTTGGAGGACAACTGAAGACTGTATGCTTCCCTACGGTTGCTGAACAATTGAAGGAAAATAGGAAAAGGGTTGAGTTATGGAATCGCTCTAAGTTGGATGAACAGTCTCTCACGACTATTGAGTTGAATGCGCGAATCAACGTGCAAAAATTTGCACACCAACATCTATCTACACCAAAACATGATTATGTTGAAAGTTACAATCTTGGATATGATTGTGATGATTCTGATGAAGCTGTGTACTACGTGTATCCAGGAAGCAGTGTTTCAGAGTGGTTGGAGCATAGAACAATGGAGGATTCTATACTTATTGATCTCTCTTCTACTCCTCAGTCTGGCTTCATTTTCTGCTTCATCCTCGGGAAGCAAATACTCTCTTTTTATAAAAAGTTGGTATTTGAAATCACAATCAGTGATGGTGAAGGTGAAGGTAATGAAGACAAGGGCAGTGCCACAATGCGCATACCTAACCCTCCCCTATTTGTTGATTCAGATCATGTGTGTTTGATGTACAACCAAAGATGTTCTGACTACCTAAATAGCAGAGCTACAGATCTAACAAGATTTAATATCAAGGTTACGAGGAGGGGGATATATGGTGCGCCTAAAGAGGTTCCGTTAAAAGGAAGGAGGAATGTAGTCATTGACTCAGAATGCCCAATATGTCAACAAGAAGCTGAGACTGTGGAACATATGTTGCTTAGATGCTCTAGCAGAATGTTTTATTACTATGTGGTCTATCTGGAACGAGAGGAATCAGCTACTCGATTGTCAATCTACCCCCAATCCTTTGGCTACAGTCATAAAAATCAAAAGACTCAACAGATGAAGGTGTTAACCATCTATCATCATCGGGTAGAAGAAGAAATACCTTCTTTAGGATTTATCAAGTGTAATACTGATGCTGCTTTTCAAATGGGTGTGGCAGAGATATCAATCTTCCTTCTCTACGTGTATGCCTTTCCTTCTTTGGAGCTTGAGGAATTGGTTCTTGAATATGTTGATGCTGGGAAACTCCCTAAGATAAGGATTTCCAGCTTAAGTCTCAAGAGACTTGAATTCCACCTTGTATTTGAAAATGGTTTTAGTACCACCAGATATCCCAAGGTCTTTATTGTTTTGAAAGATCATAAGGAAGTGATAATTCTGGATCTGGATGGTGGGTTGATTGAAGTTATGCTTTCTTTTTTCCATCGAGTTGAGGATTTGGAGTCTACATCAAGAATAATTATAGCATCAAGTTCTGTTAATTTGAAGAATGAAATTTTGACTCCTATGCCTCCCCACTTGGCTTTCAATATGGTGTTATATATCTTGTACCAGCAACTTCACACAGATCTTTTCGGAAAAATTATCAAGAATAATAGTCTTGTGGTTGTCTTGTTGAGAAGGACACCACCACTGTAA 3708 0.3848 MSTYSVSKKRKLKKVDDGGKSVSETKYDVFVSFRGEDIRDGFLSHLIKAFHRKNLKAFVDDQLERGDEIWPSLVEKIEGSFISLIIFSADYASSRWCLEEVVKILDCRDKYQQIVIPVFYHVDPTCVQHQTGTYENSFAEHGKKYDSTKVQIWRDALNISANLAGIKSSDVRNDADLVEEVVNLLLKRLCKYPVNSEGLVHSKRLIGIDRQMADVERLLHHPRVIGIWGMGGIGKTTIAIEVYNKLRSKYNGCCFLQNVREESSRHGIISLKEKLFSKLIGEDVKIDTPNGLSSDIERRINGMKVLIVLDDVNDSDHLENLLGEACDMLGSESRIIITTRNKQVLSTAFKAYDIHEVGVLSPSEALELFNLNAFNRSHLKKEYRKLSKRVVRYASGIPLVLKVLGRLLHGKDNEVWESQLNKLEKMPDQQVYDVMRLSYDDLDRKEKKIFLDLACFFIGSGLKVGEIKSLLRDGKSDNSVTVVFERLKDKALVTFSEDNCVSMHDIIREMAWEIVRQESSEDPGSRSRLWDPDDCREVLENDKGTEAIRSIRIYLHWINYPQATLPQNFSAEKLVILNLSSYSKIVKLWDRVQNLVNLKQVILNRCLNLLELPDFSKATNLEVLEARYCKELSGVHSSIFSLNKLNTLDLSWCDKIATITSDTHLSSLSYLKLDYCDSLREFSLTSENMKKLDLTWTKVRALPSSFERQSKLEILCLRESHIKELPSCMKKLTRLQYLDIRNCRELQTIPELPPSLQTLLAGDDHWFLGGQLKTVCFPTVAEQLKENRKRVELWNRSKLDEQSLTTIELNARINVQKFAHQHLSTPKHDYVESYNLGYDCDDSDEAVYYVYPGSSVSEWLEHRTMEDSILIDLSSTPQSGFIFCFILGKQILSFYKKLVFEITISDGEGEGNEDKGSATMRIPNPPLFVDSDHVCLMYNQRCSDYLNSRATDLTRFNIKVTRRGIYGAPKEVPLKGRRNVVIDSECPICQQEAETVEHMLLRCSSRMFYYYVVYLEREESATRLSIYPQSFGYSHKNQKTQQMKVLTIYHHRVEEEIPSLGFIKCNTDAAFQMGVAEISIFLLYVYAFPSLELEELVLEYVDAGKLPKIRISSLSLKRLEFHLVFENGFSTTRYPKVFIVLKDHKEVIILDLDGGLIEVMLSFFHRVEDLESTSRIIIASSSVNLKNEILTPMPPHLAFNMVLYILYQQLHTDLFGKIIKNNSLVVVLLRRTPPL. 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10958 1235 Gene3D - 359 443 IPR042197 -
Seca3g10958 1235 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 761 IPR044974 GO:0006952
Seca3g10958 1235 Gene3D Ribonuclease Inhibitor 551 686 IPR032675 -
Seca3g10958 1235 Pfam NB-ARC domain 222 429 IPR002182 GO:0043531
Seca3g10958 1235 SUPERFAMILY L domain-like 503 759 - -
Seca3g10958 1235 Gene3D - 24 193 IPR035897 -
Seca3g10958 1235 Gene3D - 194 352 IPR027417 -
Seca3g10958 1235 Pfam TIR domain 26 189 IPR000157 GO:0007165
Seca3g10958 1235 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 165 IPR035897 -
Seca3g10958 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 453 IPR027417 -
Seca3g10958 1235 SMART till_3 26 163 IPR000157 GO:0007165
Seca3g10958 1235 PRINTS Disease resistance protein signature 224 239 - -
Seca3g10958 1235 PRINTS Disease resistance protein signature 299 313 - -
Seca3g10958 1235 PRINTS Disease resistance protein signature 640 656 - -
Seca3g10958 1235 PRINTS Disease resistance protein signature 394 408 - -
Seca3g10958 1235 Gene3D Ribonuclease Inhibitor 687 874 IPR032675 -
Seca3g10958 1235 ProSiteProfiles TIR domain profile. 25 189 IPR000157 GO:0007165
Seca3g10958 1235 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10958 Seca-Chr3 256433144 256439293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10958 23 751 WRKY Transcription Factor Family AT4G12020 29.975 3.06e-73 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10958 - - aprc:113850949 1054.28