Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10957 ATGGTATACAGCTACACAAAGAGCTTTAATGCATTTGCTGCTAAATTGTCTGAGGATGAAGCCAATAAGCTATCTGCCATGGATGAAGTGCTTTCAGTAATTCCAAATCAGTACCGCAAGCTACACACAACAAGATCATGGGACTTTATTGGATTACCTTTGACTGCTAAGAGAAAACTGAATTCAGAGAGTGACACAATTGTGGCTCTTTTGGATTCAGGGATCACTCCTGAGTTTCAAAGCTTCAAGGATGATGGATTTGGTCCTCCACCCGCTAAATGGAAAGGAACTTGTGACCAATATGCTTATTTCTCAGGCTGCAATAACAAGATCATAGGAGCCAAATACTTCAAGATTGATGGAAGGTCTGATCCATCTGACATATTATTTCCCATAGATGTGGATGGTCATGGCACTCACACTGCATCAACAGCAGCAGGAAATATTGTCCCAAATGCAAGTCTCTTTGGGTTAGCAAAAGGGACTGCTCGTGGTGCAGTGCCTTCAGCCAGGTTGGCAATTTACAAAATCTGCTGGACAAAAGATGGATGTGCTGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCCATTTCTGTAGGTGGAGGGAATGCAAAATATGTGGAGGACTGTATAGCCATTGGAGCATTTCATGCCATGAGGAAAGGCATAATCACAGTGGCCTCAGCTGGTAATGATGGTCCAACTATGGCAACTGTCACAAATAATGCACCTTGGATTGTAACTGTAGCTGCTAGTGGCATTGATAGGGATTTCCGGAGCACTATAGAGTTGGGGAATGGAAAAAATATTTCTGGGGTAGGAGTGAGCACCTTCAATCCAAAACTAAAGCAGTACCCCCTTATTATTGGAATTGATGCAGCCAGAAACTCTGCAAGCAAGGAAAATGCTAAATTCTGCTTTGAAGACTCCTTAGAGCCAAATAAGGTGAAAGGAAAGCTTGTTTACTGTATAGGAGGAACATGGGGCACTGACTCTGTCTTGAAGGCCATTGGAGGCATTGGTACTATAATTGAAAGGGACCAATTTCTTGATGTTGATCAAATATTCATGGCTCCTGCTACCATTGTGAATAGTAGCATAGGTGAAATTATTACCAATTATATGCACTCCACAAGATCACCATCAGCAGTGATATATAAGAGCCATGAAGTAAAAAGACCAGCTCCATTTGTTGCTTCATTTTCATCTAGGGGTCCAAATCCAGGATCTCAACATGTTCTCAAGCCTGATGTTACAGCACCTGGCATTAACATCTTGGCATCTTATACACTCAAGAAGTCACTTACAGGTTTGAAAGGGGATACCCAATTTTCAGAATTTACCCTAATGTCTGGGACTTCTATGTCATGCCCTCATGTTTCTGGAGTAGCAGCATATGTGAAGTCATTTCACCCAGATTGGTCTCCTGCAGCAATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGTCAGAGAGTTACCAAGGAGGGAGAATTTGGCTTTGGTGCTGGTCAAGTGAACCCAACAAGAGCTGTGAACCCTGGTTTAGTCTATGACATGGATGACTTTGGTTATATTCAGTTCTTATGCCATGAGGGCTATAATGGTTCCACTTTGTCAGTGTTAGTTGGTTCTCCTGTAAATTGCACTTCTTTGCTTCCTGGGCTTGGCCACGATGCTATCAACTATCCCAGCATGCAACTAAGTGTGAAAAGCAACACAGATACAACAGTAGGAGTTTTCAGGAGAAGAGTGACCAATGTAGGTCCTGCACCAACTATCTATAATGCCACCATCAAATCTCCCAAAGGAGTGGAAATGACAGTGAAGCCTACTAGCCTCATTTTCTCTCACACCATGCAGAAGCGGAGCTTCAAGGTAGTGGTGAAAGCAAAATCTATGGCAAGCATGAAAATTGTATCAGGTGCCCTTATTTGGAGAAGCTCCCGTTACACTGTTAGGAGCCCTATTGTTATCTATAGTCCATAA 2019 0.4255 MVYSYTKSFNAFAAKLSEDEANKLSAMDEVLSVIPNQYRKLHTTRSWDFIGLPLTAKRKLNSESDTIVALLDSGITPEFQSFKDDGFGPPPAKWKGTCDQYAYFSGCNNKIIGAKYFKIDGRSDPSDILFPIDVDGHGTHTASTAAGNIVPNASLFGLAKGTARGAVPSARLAIYKICWTKDGCADMDILAAFEAAIHDGVDVISISVGGGNAKYVEDCIAIGAFHAMRKGIITVASAGNDGPTMATVTNNAPWIVTVAASGIDRDFRSTIELGNGKNISGVGVSTFNPKLKQYPLIIGIDAARNSASKENAKFCFEDSLEPNKVKGKLVYCIGGTWGTDSVLKAIGGIGTIIERDQFLDVDQIFMAPATIVNSSIGEIITNYMHSTRSPSAVIYKSHEVKRPAPFVASFSSRGPNPGSQHVLKPDVTAPGINILASYTLKKSLTGLKGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWSPAAIRSAIITTAKPMSQRVTKEGEFGFGAGQVNPTRAVNPGLVYDMDDFGYIQFLCHEGYNGSTLSVLVGSPVNCTSLLPGLGHDAINYPSMQLSVKSNTDTTVGVFRRRVTNVGPAPTIYNATIKSPKGVEMTVKPTSLIFSHTMQKRSFKVVVKAKSMASMKIVSGALIWRSSRYTVRSPIVIYSP. 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10957 672 ProSiteProfiles Serine proteases, subtilase domain profile. 46 522 - -
Seca3g10957 672 SUPERFAMILY Subtilisin-like 41 526 IPR036852 GO:0004252|GO:0006508
Seca3g10957 672 CDD Peptidases_S8_3 40 496 IPR034197 -
Seca3g10957 672 Pfam Peptidase inhibitor I9 2 42 IPR010259 -
Seca3g10957 672 FunFam Subtilisin-like protease SBT1.5 65 288 - -
Seca3g10957 672 Pfam Subtilase family 64 512 IPR000209 GO:0006508|GO:0008236
Seca3g10957 672 ProSitePatterns Serine proteases, subtilase family, serine active site. 461 471 IPR023828 -
Seca3g10957 672 CDD PA_subtilisin_like 270 394 - -
Seca3g10957 672 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Seca3g10957 672 Gene3D Peptidase S8/S53 domain 65 532 IPR036852 GO:0004252|GO:0006508
Seca3g10957 672 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 668 IPR045051 -
Seca3g10957 672 PRINTS Subtilisin serine protease family (S8) signature 460 476 IPR015500 -
Seca3g10957 672 PRINTS Subtilisin serine protease family (S8) signature 133 146 IPR015500 -
Seca3g10957 672 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Seca3g10957 672 Gene3D - 539 671 - -
Seca3g10957 672 Pfam Fibronectin type-III domain 571 669 IPR041469 -
Seca3g10957 672 Gene3D - 264 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10957 Seca-Chr3 256426577 256432610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10957 2 508 Subtilisin-like Serine Gene Family AT4G00230 66.864 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10957 - - ccaj:109800351 1185.24