Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10953 ATGATGAAGAAGATTGACCTTCTTGAAGCTTCAAAACGGAAACTCTTGGGAGAAGGTTTGGGGTCTTGTTCCATTGATGAACTACAACAGATAGAACAACAACTGGAGAAGAGTATAATCAATGTTCGAGCAAGAAAGACTCAGGTTTTCATGGAACAAATTGAGCAACTAAAAGAAAAGGAAAAAGCCCTTGTTGCAGAAAATTCCAGGCTTTCTGAGAAGGTGAAAATTTCTCTGCAGTGTGGTATCTGTTCACAGCCAGCAGCAACAAAGGATCAGAGAGAAAATCAACCCCAACCCTATGCAGAAAGCAGTCCAAGTTCAGATGTTGAGACTGAATTGTTCATTGGTCTTCCAGAAGCAAGAACAAGGCGCATTTCTCCTCAGGCCTAG 393 0.4173 MMKKIDLLEASKRKLLGEGLGSCSIDELQQIEQQLEKSIINVRARKTQVFMEQIEQLKEKEKALVAENSRLSEKVKISLQCGICSQPAATKDQRENQPQPYAESSPSSDVETELFIGLPEARTRRISPQA. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10953 130 MobiDBLite consensus disorder prediction 88 111 - -
Seca3g10953 130 MobiDBLite consensus disorder prediction 88 113 - -
Seca3g10953 130 Coils Coil 25 45 - -
Seca3g10953 130 ProSiteProfiles K-box domain profile. 1 83 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca3g10953 130 Coils Coil 54 74 - -
Seca3g10953 130 Pfam K-box region 1 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10953 Seca-Chr3 256354264 256355676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10953 1 62 MADS-box Gene Family AT2G45660 80.645 2.06e-27 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10953 - - lja:Lj0g3v0285839.1 159.458