Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10939 ATGTCCAAATTTGATCCATTCACCTACTTCAATCTGACTCTCAACCCTGACGGAACCCTCACCCGTGGCCTCAAGTATCCGACGGTGGAAGCGAACCCAGAGCCATCTCCGGGTAACTCCACAGTTTCCAAAGACATAACCATTGACCAAGAGAACAAAACATGGGTTCGAGTTTTCAGACCAACAAAGCTTCCTTCCAATGACAACACCGTGGTGCGTCTTCCCATCTTGATTTATTTCCACAACGGTGGCTTTATCATCCACAGCCCCTCCAGCTCCGGCATCCACGCAAAGTGCGTTCAACTCGCCACTGACATCCCCTCCATCGTCGTCTCCGTTGCCTACCGCCTCGCACCGGAGAGCCGCCTCCCGACACAGTACAACGACGCACGCGACGCTGTTTTGTGGGTGAAGAAACAAATGACGGATCCGAACGGGGAGGAGTGGCTGAGGAACTACGGTGACCCTTCAAGATGTTACCTTTATGGATGTGGATGTGGCGGGAACATTGCTTTCAACGTGGCCATGATGGTTGCTGACGTGGACTTAGAGCCTTTGAGGATTGGTGGACTGATATTTAACCAACCCATGTTTGGAGGGGAGAAAAGGACTGCCTCGGAATTAAGGTTTGCTACGGACCAAACACTGCCTTTGCCGGTTTTGGACATGATGTGGGACTTGGCTTTGCCTAAGGAGACAGACCGTGACCATAGGTATTGTAATCCGATGGTGAAAGGACCACACTTTGATAGTGTGAAGAAGTTGAAGAGGTGCCTTGTTGTTGGGTATGGTGGGGATATCATGGTGGATAGGCAGCAGGAGTTAGTGACAATGTTGGTAAAGTGTGGGGTTCAGGTGGAAGCGAGGTTTGATCCGGTGGGCTTCCATAACATTGACGTTGTTGACCCTTCCAGGGCTACCGCCGTAACAAATATTGCCAGGGAATTCATTCTTTGA 957 0.5068 MSKFDPFTYFNLTLNPDGTLTRGLKYPTVEANPEPSPGNSTVSKDITIDQENKTWVRVFRPTKLPSNDNTVVRLPILIYFHNGGFIIHSPSSSGIHAKCVQLATDIPSIVVSVAYRLAPESRLPTQYNDARDAVLWVKKQMTDPNGEEWLRNYGDPSRCYLYGCGCGGNIAFNVAMMVADVDLEPLRIGGLIFNQPMFGGEKRTASELRFATDQTLPLPVLDMMWDLALPKETDRDHRYCNPMVKGPHFDSVKKLKRCLVVGYGGDIMVDRQQELVTMLVKCGVQVEARFDPVGFHNIDVVDPSRATAVTNIAREFIL. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10939 318 PANTHER ARYLACETAMIDE DEACETYLASE 14 296 - -
Seca3g10939 318 SUPERFAMILY alpha/beta-Hydrolases 29 305 IPR029058 -
Seca3g10939 318 Gene3D alpha/beta hydrolase 7 318 IPR029058 -
Seca3g10939 318 Pfam alpha/beta hydrolase fold 77 297 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10939 Seca-Chr3 256147009 256149027 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10939 17 307 Carbohydrate Esterase AT5G16080 33.670 1.53e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10939 - - gmx:100813863 520.39