Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10929 ATGAGTCTGAAGCTTGGTAACATAACCACCATAGTCATTTCCTCTCCACAAGTTGCCAGAGAAGTGCTACATAAAAATGACCAAATCTTCTCTAACAGGACAGTCCCAGATACTGTTCGAGCACTTGATCACCACAAATTTTCAATGGCATGGATGCCTCTTTCAGCTAAATGGAGGACCCTTAGGAAAATTTGTTCTACCAATATATTCTCTTCCAATAAGCTTGACTCTACACAAGTTCTCCGTCAAAGGAAGGTTCAAGAATTGCTGGATCATGTTAAGGAATGTTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCCTTTATTACCGTGCTTAATTCCATATCAAACACCTTCTTCTCTATGGATTTGGCTCATTACACTTCTAATAAATCTCAAGAGTTCAAAGACATCATTTGGGGTATCATGAAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTCCCAATCTTTCGTTTGCTTGATCCACAACGTGCTCGTGCAAGAATGACCCGTTATTTTGGAAAGTTAATTGCATTTTTTGATAGTCTTGTAGAAGAAAGGTTGCGCTTAAGAGCTTTAGGAAATGAATCTAAGGCATGCAATGATGTGTTAGATTCGGTGGTGGTGCAAATGCTAGAAGACAATTCGCAATTGAACCGCCCTCACGTATTGCATTTATTCTTGGATTTATTTGTGGCTGGGATAGACACAACATCAAGCTCAATAGAATGGGTGATGACTGAGTTGCTACGTAACCCAGAAAAACTAGAAAAAGTTAGAGAAGAGCTTCATCAGGTCTTTGACAAAGATGAACAACTTGAAGAATCACATATATCAAAGCTTCCTTTCCTACAAGCAGTGGTGAAGGAAACTCTCCGCTTGCATCCACCTGTTCCGTTGTTATTGCCACACAAGTCAGAAGTTGATGTTGAACTATGTGGCTTTATGGTGCCTAAAAATGCACAAATTCTAGTTAATGTATGGGCCATGGGGAGAGATCCAAGTATTTGGAAAAACCCAAATCAATTCATGCCAGAGAGATTCTTAGACAATGAGATTGATTTTAAAGGTCAGTATTTTGAGTTAATTCCCTTTGGATCTGGAAGAAGGATCTGCCCTGGGTTGCCATTGGCTCATAGAACAATACATATTGTGTTGGCCTCTCTCCTATATAGTTATAATTGGAAGCTGACGTGTGGGCAAATTCCAGAGGAGATGGACATGTCTGAGAAATATGGCATTACTTTGAACAAGTCACAACCCCTCCAAGTTATCCCCATCCAAGCATAA 1299 0.4003 MSLKLGNITTIVISSPQVAREVLHKNDQIFSNRTVPDTVRALDHHKFSMAWMPLSAKWRTLRKICSTNIFSSNKLDSTQVLRQRKVQELLDHVKECCKKGQALDIGEASFITVLNSISNTFFSMDLAHYTSNKSQEFKDIIWGIMKEAGRPNVVDFFPIFRLLDPQRARARMTRYFGKLIAFFDSLVEERLRLRALGNESKACNDVLDSVVVQMLEDNSQLNRPHVLHLFLDLFVAGIDTTSSSIEWVMTELLRNPEKLEKVREELHQVFDKDEQLEESHISKLPFLQAVVKETLRLHPPVPLLLPHKSEVDVELCGFMVPKNAQILVNVWAMGRDPSIWKNPNQFMPERFLDNEIDFKGQYFELIPFGSGRRICPGLPLAHRTIHIVLASLLYSYNWKLTCGQIPEEMDMSEKYGITLNKSQPLQVIPIQA. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10929 432 Gene3D Cytochrome P450 1 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Seca3g10929 432 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS E-class P450 group I signature 329 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PRINTS E-class P450 group I signature 288 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 Coils Coil 259 279 - -
Seca3g10929 432 FunFam Cytochrome P450 76C4 1 428 - -
Seca3g10929 432 SUPERFAMILY Cytochrome P450 2 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 431 - -
Seca3g10929 432 Pfam Cytochrome P450 2 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10929 432 CDD CYP76-like 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10929 Seca-Chr3 255986621 255989736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10929 1 431 Cytochrome P450 AT2G45550 48.848 5.96e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10929 - - gmx:100809483 706.057