Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10928 ATGTGGATAAGCATTATTCATGTCCTCAACAAAAGACCCAAATCCTCCAAATACCCTCCACCTCCAGGACCTCACCCTTTTCCTATTATAGGAAATATCTTGGAACTTGGCAACCAACCTCACCAAGCACTTGCCAAACTTTCTCAAACTCATGGACCTATAATGAGTCTGAAGCTTGGTAACATAACCACCATAGTCATTTCCTCTCCACAAGTTGCCAGAGAAGTACTGCATAAAAATGACCAAATATTCTCTAACAGGACAGTCCCAGATACTGTTCGAGCACTTGACCACCACAAATTTTCAATCACATGGATTCCTCTTTCAGCTAAATGGGGGACCCTTAGGAAAATTTGTGCTACCAATATATTCTCTTCCAAGAAGCTTGACTCTACACAAGTTCTCCGTCAAAGGAAGGTGCAAGAATTGTTGGACCATCTCAAGGAATGTTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCTTTCACCACTGTGCTTAATTCCATATCAAACAGTTTATTCTCTATGGATTTGGCTCATTACACTTCTAATAAATCTCAAGAGTTCAAAGACATCATTTGGAGTATCATGGAAGAAGCTGGAAGGCCTAACATTGTGGACTTTTTCCCAATCTTTCGTTTGTTTGATCCACAACGTGCTCGTGCAAGAATGACCCGTTATTTTGGAAAGTTAATTGCATTTTTTGATGGTCTTATAGAAGAAAGGTTGCGCTTAAGAGCTTTAGGAAATGAATCTAAGGCATACGATGATGTGTTAGATTCTGTGTTGGTGCAAATGCTAGAAGACAATTCGCAAGTTTTATTTGTGGCTGGGATAGACACAACATCAAGCTCGATAGAATGGGCGATGACTGAGTTGCTACGTAACCCAGAAAAACTAGAAAAAGTTAGAGAAGAGCTTCATCGGGTCTTTGACAAAGATGAACAACTTGAAGAATCACAAATATCAAAGCTTCCTTACCTACAAGCAGTGGTGAAGGAAACTCTCCGCTTGCATCCACCTGTTCCGTTGTTATTGCCACACAAGTCAGAATTTGATGTTGAACTATGTGGCTTTATGGTTCCAAAAAATGCACAAATTCTAGTTAATGTGTGGGCCATGGGGAGAGATCCAAGCATTTGGAAAAACCCAAATCAATTCATGCCAGAGAGATTCTTAAACAATGAGATTGATTTTAAAGGTCAGTGTTTTGAGTTAATTCCCTTTGGATCTGGAAGAAGGATCTGTCCTGGGTTGCCATGGGCTCATAGAACAATACATATTGTGTTGGCCTCTATACTATTTAGCTATAATTGGAAGCTGGCGCGTGGGCAAATTCCAAAAGAGATGGATATGTCTGAGAAATATGGCATTACTTTGCACAAGGCACAACCCCTCCAAGTTATCCCCATCCAAGCATACTTAAGGATCAAAACACCCAAATCCTCCAAATACCCTCCAGGACCTCACCCTTTTCCTATCATAGGAAATATTTTGGAACTTGGCAACCAACCTCACCAGGCACTTGCCAAGCTTTCTCAAACTTATGGACCTGTAATGAGTCTAAAGCTTGGTAACATAACCACCATAGTCATTTCCTCTCCACAAGTTGCCAAAGAAGTAATGCACAAATATGATCAAATCTTCTCTAACAGGACAATCCCAGATACTCTGACAGCACTTGACCATCACAAATTTTCAGTTGTATGGATGCCACCTTTAGCAATGTGGAGGACTCTTAGGAAAGCTTGTGCTACTAAAGTGTTCTCTTCTCAACAGCTTGATTCTACACAAGGTCTTCGCCAAAGGAAGGTGCAAGAATTGTTGGATCATGTTAAGGAATGTTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCTTTTACCACTGTGCTTAATTCCATATCAAACACTTTTTTCTCTATGGACTTGGCTCATTACACTTCTGATAAGTCTCAAGAGTTCAAGGATATCGTTTGGGGTATCATGGAAGAAGCTGGAAAGCCTAATGTTGTGGACTTTTTCCCAATCTTTCGCCTGCTTGATCCACAAGGTGCACGTACAAGAATGAACAATTATTTTGAAAAGTTGATTTCATTTTTTGATGGTCTTATAGAAGAAAGATTGCACTTAAGAGCTTCAGAAAATGAAATCAAGGAATGCAATGACGTGTTAGACTCTATGATAGAACTTATGCTAGAAGACAATTCAGAAGTAAGCCGTCCTCATGTATTGCATTTATTTCTGGTAAGTATCTTTATCAAATTCAAGATCTTAATTTCTTTACACCAAAATTCAAGGTGA 2313 0.3969 MWISIIHVLNKRPKSSKYPPPPGPHPFPIIGNILELGNQPHQALAKLSQTHGPIMSLKLGNITTIVISSPQVAREVLHKNDQIFSNRTVPDTVRALDHHKFSITWIPLSAKWGTLRKICATNIFSSKKLDSTQVLRQRKVQELLDHLKECCKKGQALDIGEASFTTVLNSISNSLFSMDLAHYTSNKSQEFKDIIWSIMEEAGRPNIVDFFPIFRLFDPQRARARMTRYFGKLIAFFDGLIEERLRLRALGNESKAYDDVLDSVLVQMLEDNSQVLFVAGIDTTSSSIEWAMTELLRNPEKLEKVREELHRVFDKDEQLEESQISKLPYLQAVVKETLRLHPPVPLLLPHKSEFDVELCGFMVPKNAQILVNVWAMGRDPSIWKNPNQFMPERFLNNEIDFKGQCFELIPFGSGRRICPGLPWAHRTIHIVLASILFSYNWKLARGQIPKEMDMSEKYGITLHKAQPLQVIPIQAYLRIKTPKSSKYPPGPHPFPIIGNILELGNQPHQALAKLSQTYGPVMSLKLGNITTIVISSPQVAKEVMHKYDQIFSNRTIPDTLTALDHHKFSVVWMPPLAMWRTLRKACATKVFSSQQLDSTQGLRQRKVQELLDHVKECCKKGQALDIGEASFTTVLNSISNTFFSMDLAHYTSDKSQEFKDIVWGIMEEAGKPNVVDFFPIFRLLDPQGARTRMNNYFEKLISFFDGLIEERLHLRASENEIKECNDVLDSMIELMLEDNSEVSRPHVLHLFLVSIFIKFKILISLHQNSR. 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10928 770 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 Coils Coil 302 322 - -
Seca3g10928 770 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 474 - -
Seca3g10928 770 SUPERFAMILY Cytochrome P450 482 753 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 SUPERFAMILY Cytochrome P450 21 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 FunFam Cytochrome P450 76C4 12 471 - -
Seca3g10928 770 Gene3D Cytochrome P450 475 757 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 Gene3D Cytochrome P450 6 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 Pfam Cytochrome P450 21 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 Pfam Cytochrome P450 488 749 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 72 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 48 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10928 770 Coils Coil 714 734 - -
Seca3g10928 770 CDD CYP76-like 48 472 - -
Seca3g10928 770 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10928 Seca-Chr3 255961439 255973836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10928 470 752 Cytochrome P450 AT2G45550 41.958 4.63e-71 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10928 - - gmx:100809483 723.005