Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10921 ATGGAGGTTTTGTACACCCTGTTGACTTTCATAGCCTTTTCTTTTCTGTGTCTCTTCCTGGCCTTTTGTTTCATCATGATGACCATCTTCATGGGAAAATCCATAGGGAACCCAGAATACGCACCTGTAAAAGGCACAATGCTTCACCAGCTATTCTACTTCAACAAACTCCATGATTACCATACTCAATTGGCCAAAACACATCCAACTTTCAGGCTTCTTGTTCCATATCAAAGCGAGTTGTACACTGTAGACACAAAAAATGTTGAACACATACTCAAAACCAACTTTGACAAGTACTCCAAAGGCAAGTATAACCAGGATATTATGAAAGATCTTTTTGGTCAGGGGATTTTCAATGTTGATGGTGACAAGTGGAGGCAGCAGAGGAAGCTTGCAAGTTATGAATTCACCACAAGAGTTCTTAGAGATTTCAGCTGCTCTGTCTTTAGAACTAATGCTGCCAAGTTGGTCAGAGTTATGTCAGAATTTTCCCATGAGGGTCTGGTTTTTGATATGCAGGGCTTACTAATGAGAAGCGCTTTGGACTCCATTTTCAAAGTTGGGTTTGGAACAGAATTGAACTGCTTAGAGGGATCAATCAAGGGGGGAAATGAATTCATGAAGGCCTTTGATGAGTCAAATGCTTTGATTTATTTGCGCTATGTTGATCCATTCTGGAGGCTCAAGAAGTTTCTTAACATTGGTAGTGAAGCTGCCCTTAAGCGCAATGTGAAATTATTAGATGATTTCGTTTTTGGAGTAATTAAGACTAGAAAAGCACAGTTGGCAGTTCAGCAAGATCCTAATGTTAAAGAGGACATACTATCAAGGTTTCTGATGGAGAGCAAGAAGGACCAAAAAACTATGACTGACCAATATTTAAGGGATATAATTCTGAACTTCATGTTTGCTGGCAAAGACTCAAGTGCAAACACTCTTTCATGGTTCTTCTACATGCTGTGCAAGAACCCTCTTGTAGAGGAAAAGATTGTGCAAGAAGTGAGAGATGTCACTTGTAGTCATGAAAGTGAACCCAACATTGATGAGTTTGTCTCCCATTTAAAGGATGCCACCCTTGATAAAATGCATTATCTTCATGCAGCATTGACAGAGACCTTGAGATTGTACCCTGCAGTCCCTGTGGATGGAAGGATTGCAGATGTAGCTGATGTTCTTCCTGATGGTCACAAACTGAAAAAGGGAGATGGAGTGTACTATTTGGCCTATAGTATGGGTCGGATGTCTTCCATTTGGGGGGAAGATGCTGAGGAATTTCGTCCTGAAAGATGGCTCAACAATGGAATTTTCCAACCCCAATCCCCATTCAAATTCACAGCTTTCCATGGTGGACCACGTATCTGTTTGGGGAAGGACTTTTCTTACAGACAAATGAAAATAGTAGCAATGGCTCTTGTTCGTTTCTTCAAGTTTAAACTGGCAAATGAAACTCAGAATGTGACTTATAGGGTCATGTTTACCCTTCATGTTGATAAGGGTCTCCCTCTCCATGCAATTCCAAGGATGCCATCTTTGGATTTTCTTTCAAATCTTTATCTCCTTGCAGTTCTGTCTGCAGCTTTAACCCTTTTGGTGGTTCAAGTTTTGTTCAGCAAATGGAACATATCACACAGAAAGAACAAGTACCATCCTGTTGCTGGTACTGTGTTTAATCAGATGCTCAACTTCAACAGGCTGCACCATTATATGACAGATCTTGCAGGGAAGTACAAGACATACAGGTTGCTCAATCCTTTCAGAAATGAGATTTACACAGCAGAACCCAGAAATGTTGAGTATATACTCAAAACCAATTTTGAGAATTATGGAAAGGGGTTGTACAACTATGACAATTTGAAGGATTTACTAGGTAATGGGATTTTCACTGTTGATGGTGAGAAATGGCGTGAGCAAAGAAAGATATCAAGTCATGAATTCTCCACCAAGATGTTAAGGGACTTCAGCACTTCAATTTTCAGAAAGAATGCAGCAAAACTTGCAAACATAGTGTCTGAAGCTGCAACTTCTAATAATACGTTGGAAATCCAAGACCTTTTAATGAAATCAACTCTGGATTCAATTTTCCAAGTTGCATTTGGAACTGAACTTGACAGCATGTGTGGATCAAGTGAAGAAGGGAAGACCTTTGCTGAAGCATTTGATACTGCTAGTGCATTAACCCTTTATCGTTATGTTGATGTCTTCTGGAAGCTAAAGAAATTTCTGAATATTGGATCAGAGGCCACATTAAGAAAAAAAGCTAAAATTTTGAATGAATTTGTCTTTAAGCTAATCAACACTAGAGTTCAGCAAATGCAGACTTCAAAGAATGATTCAGTTAGCACACGAGGAGATATTCTCTCAAGGTTTCTGCAAGTGGAGGGATATGAATTAACATACTTGAGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACAACTGCTACCACACTTGCTTGGTTAATGTACGTGCTATGCAAGTATCCTGCAGTACAAGAAAAGGCTGCAGAAGAAGTGAAAGAAGCAACAAACACAAAAACAATTAGAAGCTGCACTGAGTTTGTGTCAAGTGTAACGGACGAAGCTCTTGAAAAGATGAACTATCTCCATGCAACAATTACTGAAACTCTCAGACTTTACCCTGCAGTTCCCGTGGATGCAAAGATTTGCTTTGCTGATGATACATTACCAGATGGATATAGCGTAAAAAAAGGAGATATGGTATCTTACCAACCTTATGCAATGGGACGGATGAAATTCATATGGGGTGATGATGCAGAGGAATTTAGACCAGAAAGATGGCTTGATGAGAATGGCATTTTTCAGCCAGAGAGCCCTTTCAAGTTTACAGCTTTTCAGGCAGGGCCTCGGATTTGTCTAGGAAAGGAGTTTGCTTACAGACAGATGAAGATATTCTCAGCAGTTTTGTTAGGCTGTTTCCGCTTCAAATTGAATGATGAGAAGAAAAATGTCACTTACAAGACGATGATAAATCTTCATATTGATGGAGGTCTTGAAGTCAAAGCCTTCCACAGAAACAGGGATTAG 3054 0.3962 MEVLYTLLTFIAFSFLCLFLAFCFIMMTIFMGKSIGNPEYAPVKGTMLHQLFYFNKLHDYHTQLAKTHPTFRLLVPYQSELYTVDTKNVEHILKTNFDKYSKGKYNQDIMKDLFGQGIFNVDGDKWRQQRKLASYEFTTRVLRDFSCSVFRTNAAKLVRVMSEFSHEGLVFDMQGLLMRSALDSIFKVGFGTELNCLEGSIKGGNEFMKAFDESNALIYLRYVDPFWRLKKFLNIGSEAALKRNVKLLDDFVFGVIKTRKAQLAVQQDPNVKEDILSRFLMESKKDQKTMTDQYLRDIILNFMFAGKDSSANTLSWFFYMLCKNPLVEEKIVQEVRDVTCSHESEPNIDEFVSHLKDATLDKMHYLHAALTETLRLYPAVPVDGRIADVADVLPDGHKLKKGDGVYYLAYSMGRMSSIWGEDAEEFRPERWLNNGIFQPQSPFKFTAFHGGPRICLGKDFSYRQMKIVAMALVRFFKFKLANETQNVTYRVMFTLHVDKGLPLHAIPRMPSLDFLSNLYLLAVLSAALTLLVVQVLFSKWNISHRKNKYHPVAGTVFNQMLNFNRLHHYMTDLAGKYKTYRLLNPFRNEIYTAEPRNVEYILKTNFENYGKGLYNYDNLKDLLGNGIFTVDGEKWREQRKISSHEFSTKMLRDFSTSIFRKNAAKLANIVSEAATSNNTLEIQDLLMKSTLDSIFQVAFGTELDSMCGSSEEGKTFAEAFDTASALTLYRYVDVFWKLKKFLNIGSEATLRKKAKILNEFVFKLINTRVQQMQTSKNDSVSTRGDILSRFLQVEGYELTYLRDIILNFVIAGKDTTATTLAWLMYVLCKYPAVQEKAAEEVKEATNTKTIRSCTEFVSSVTDEALEKMNYLHATITETLRLYPAVPVDAKICFADDTLPDGYSVKKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMINLHIDGGLEVKAFHRNRD. 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10921 1017 Pfam Cytochrome P450 42 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 Pfam Cytochrome P450 550 996 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Seca3g10921 1017 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 Gene3D Cytochrome P450 543 1016 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 CDD CYP86A 69 501 - -
Seca3g10921 1017 Gene3D Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 CDD CYP86A 578 1007 - -
Seca3g10921 1017 PRINTS P450 superfamily signature 961 972 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PRINTS P450 superfamily signature 811 828 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PRINTS P450 superfamily signature 873 884 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PRINTS P450 superfamily signature 952 961 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 SUPERFAMILY Cytochrome P450 548 1014 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PANTHER CYTOCHROME P450 26 501 - -
Seca3g10921 1017 PRINTS E-class P450 group I signature 951 961 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PRINTS E-class P450 group I signature 872 890 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PRINTS E-class P450 group I signature 820 846 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PRINTS E-class P450 group I signature 961 984 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10921 1017 PRINTS E-class P450 group I signature 800 817 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10921 Seca-Chr3 255840221 255849673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10921 1 508 Cytochrome P450 AT2G45510 60.470 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10921 - - rcn:112167556 1196.8