Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10864 ATGTTTTTGGTGTATGAGTATATGGAAAGGGGAAGCTTATTTTACAACTTGTCCAATGATGTGGAAGCTCAAGAGTTGAATTGGAGCAAGAGGATAAACATTGTTAAAGAGATAGCCTATGCCCTGTCTCACATGCATCATCATTGTACTCAACCAATTGTTCATCGAGACGTGACTAGTAACAATGTTTTGTTGAATTCAGAGTTACAAGCTTTTGTCTCAGACTTTGGCATAGCAAGATTTCTTAATTGCCATTCATCTAATCAAAGTATGCTTGTTGGTACTCGTGGATATGTTGCTCCAGTTGATGTAGAATTGGCTTACACCTTGACTGTGACAACAAAAGTAGATGTTTATAGCTTTGGAGTGGTGGCTTTAGAAACAATGATGGGTAGACATCCAGCTGAATTGATCTCCTCTTTGTCAGAACCATCTACTCAAAACAAGAAGCTGAAAGATATATTGGACTCACGTATTCCACTACCATTTTTTCGTAAAGAGATGCAAGATATTGTGCTTGTGGCAACATTAGCATTAGCATGCTTGTGCCCTGACCCAAAATCCAGACCATCAATGCAGGAAGTAGCTAATGAGCTTATAGTTTGCAAGCCACCATTGCTTTGGCATTTTTATGACAGTTCAATCCACCAATTGATGAAACAAAAGATATATGTAATAGGTAAAAGTTAG 690 0.3797 MFLVYEYMERGSLFYNLSNDVEAQELNWSKRINIVKEIAYALSHMHHHCTQPIVHRDVTSNNVLLNSELQAFVSDFGIARFLNCHSSNQSMLVGTRGYVAPVDVELAYTLTVTTKVDVYSFGVVALETMMGRHPAELISSLSEPSTQNKKLKDILDSRIPLPFFRKEMQDIVLVATLALACLCPDPKSRPSMQEVANELIVCKPPLLWHFYDSSIHQLMKQKIYVIGKS. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10864 229 Gene3D Transferase(Phosphotransferase) domain 1 8 205 - -
Seca3g10864 229 Pfam Protein kinase domain 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g10864 229 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g10864 229 PIRSF ILK 1 203 - -
Seca3g10864 229 ProSitePatterns Tyrosine protein kinases specific active-site signature. 53 65 IPR008266 GO:0004672|GO:0006468
Seca3g10864 229 SUPERFAMILY Protein kinase-like (PK-like) 2 201 IPR011009 -
Seca3g10864 229 PANTHER LEUCINE RICH REPEAT KINASE 2 1 203 - -
Seca3g10864 229 FunFam Leucine-rich repeat receptor-like protein kinase 8 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10864 Seca-Chr3 255215515 255216759 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10864 2 204 Receptor kinase-like Gene Family AT1G72180 35.047 1.86e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca3g10864 Pkinase 9.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10864 - - vun:114165534 363.614