Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10852 ATGTCTCCTCTTTTTCTGGTATTTTTAAAGTGGAATCTTGAAGAAGTACGTACAGGTCTCTACGCTCATGAAGATACTATCTGCACACAGAAGAACGTACAGGACTCTGATTGGGGGTTAATAGGGGAAGAGTGTATATTCTCTACTTCACAAAGCAGTCCAAGGTTCACACAATATTGTAGTTATGGTTCAGTGGCACCTATGACACCAAAGAGTGTATGCAATGATAACTCATTCCTCAGGCAATATGGGGATTTTCCAAATTACATGGCTACTACTCAGTCTTTCAAGCCCAAATTGAGGCCACATAGTGCTCGAAAGCAACGACCAGAACCAGGTCAAAAGAGGAGGATTTCAATCAATGAAATGATGGAGTCTAGGAATAGTTTAAGGGGGGTTACAATGTAG 408 0.4118 MSPLFLVFLKWNLEEVRTGLYAHEDTICTQKNVQDSDWGLIGEECIFSTSQSSPRFTQYCSYGSVAPMTPKSVCNDNSFLRQYGDFPNYMATTQSFKPKLRPHSARKQRPEPGQKRRISINEMMESRNSLRGVTM. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10852 135 MobiDBLite consensus disorder prediction 105 122 - -
Seca3g10852 135 Pfam Protein of unknown function (DUF4005) 53 130 IPR025064 -
Seca3g10852 135 MobiDBLite consensus disorder prediction 97 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10852 Seca-Chr3 255119610 255120541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10852 33 135 IQD Protein Family AT3G16490 42.593 2.14e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10852 - - gmx:100797909 167.162