Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10818 ATGGCTCCTCAAGCACGAATCACCGCGTACAAAGCCTGCTGGACTGACGGTTGCTTCGCCTCAGACATACTCGCTGGAATGGATCAAGCGATCCAGGACGACGTCGAAGTGCTCTCGCTCTTCCTCGGTGGTTCCTCCTCCGCCCCTTACCACCGCGACACCATCGCAATCGGAGCATTCACAACGATGAAGAGGGGAATCTTCATTTCGTGCTCGGCGGAGAATAGCGGACCTCGAAGGAGAGAAAGGGCGGAGGATGGTGGAGAGTGGGTGCATCTGAGAGAGAGACGAGCTTAA 297 0.5657 MAPQARITAYKACWTDGCFASDILAGMDQAIQDDVEVLSLFLGGSSSAPYHRDTIAIGAFTTMKRGIFISCSAENSGPRRRERAEDGGEWVHLRERRA. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10818 98 MobiDBLite consensus disorder prediction 74 98 - -
Seca3g10818 98 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 81 IPR045051 -
Seca3g10818 98 MobiDBLite consensus disorder prediction 76 98 - -
Seca3g10818 98 ProSiteProfiles Serine proteases, subtilase domain profile. 1 98 - -
Seca3g10818 98 Pfam Subtilase family 1 79 IPR000209 GO:0006508|GO:0008236
Seca3g10818 98 Gene3D Peptidase S8/S53 domain 1 82 IPR036852 GO:0004252|GO:0006508
Seca3g10818 98 SUPERFAMILY Subtilisin-like 1 80 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10818 Seca-Chr3 254587567 254587863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10818 1 80 Subtilisin-like Serine Gene Family AT2G05920 68.750 8.52e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10818 - - gmx:100797924 130.954