Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10817 ATGGTGTCTCCACTTTCACTTATTCTATGCCTAACTCTTCTACTATGCTATAGATTTTTCAAAAAATGTAGAACCATTAACCACACAGCACCCTATCCACCTGGTCCTAGAGGCCTTCCCATAATTGGGAATCTTCATCAGCTAGACAATTCCATTCTTTATCGGCAACTATGGCAACTCTCAAAAATATATGGGCCCCTGTTTTCGCTTCAATTTGGTTTAAGGCCAGCCATTGTTGTTTCTTCCTCTGACATTGCCAAAGAGGTACTAAAAAACAATGACCTTGTGTTTTCTGATCGACCTTATTTACTTGGCCAACAGAAATTGTCCTATAATGGATCAGAGATTATATTTTCCCCATATAATGATTGTTGGAGAGAAATCAGAAAAATTTGTGTTGTCCACATCTTTAGCTCTAAGCGTGTCTCAAACTTTTCCTCTGTAAGAAAGTTTGAGATACAACAAATGATCAAAAAGATATCTGGTCATGCTGCTTCTTCAGTTGTTACAAACTTGAGTGAGTTATTGATTTCTCTCTCAAGTACTATAATATGTAGGATTGCTTTTGGGAAAAAGTATGAAGATGAAGGAACTGAAAGGAGTAAGTTCCATGGGATGCTTCATGAGTTTCAAGCCATGATGACAGCTGTCTTTGTGTCAGACTATATTCCATTCATGGGTTGGATTGATAAACTCACAGGATTGCATGCACGCCTTGAAAGAAATTTCAAGGAGTTGGATAAGTTCTACCAAGAGGTCATTGATGAACACATGCATCCCAATTATAGAAACCAAACAGAGGAAGAGGTTATAGTTGATGTCTTACTTCAATTGAAGAAACAACGTTCATTTTCAATTGATCTCACTTTTGATCACATCAAAGGTGTCCTCATGGTATGTTGTAATCCTTTTCTCTCCTTTAATTTTCTTTTAACATTTTGTGAACACCTTTTATCAATTAGTTATGCTGCAGATCAATTTACTACTTCATGCAAAAATGTTATTTTGTACCCAATGATTTTATACTTTTGA 1032 0.3605 MVSPLSLILCLTLLLCYRFFKKCRTINHTAPYPPGPRGLPIIGNLHQLDNSILYRQLWQLSKIYGPLFSLQFGLRPAIVVSSSDIAKEVLKNNDLVFSDRPYLLGQQKLSYNGSEIIFSPYNDCWREIRKICVVHIFSSKRVSNFSSVRKFEIQQMIKKISGHAASSVVTNLSELLISLSSTIICRIAFGKKYEDEGTERSKFHGMLHEFQAMMTAVFVSDYIPFMGWIDKLTGLHARLERNFKELDKFYQEVIDEHMHPNYRNQTEEEVIVDVLLQLKKQRSFSIDLTFDHIKGVLMVCCNPFLSFNFLLTFCEHLLSISYAADQFTTSCKNVILYPMILYF. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10817 343 Gene3D Cytochrome P450 26 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10817 343 Pfam Cytochrome P450 33 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10817 343 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 298 - -
Seca3g10817 343 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10817 343 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10817 343 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10817 343 SUPERFAMILY Cytochrome P450 32 298 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10817 Seca-Chr3 254577761 254578792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10817 7 303 Cytochrome P450 AT4G31500 43.771 3.83e-85 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10817 - - lja:Lj3g3v1475690.1 432.95