Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10816 ATGACAATGGTGTCTCCACTTTTACTTATTATATGCCTAACTCTTCTACTATGCTTCTTCAAGAAACATAGAACCACTAACAACAGAGCACCCTATCCACCTGGTCCTAGAGGGCTTCCCATAATTGGGAATCTTCATCAGCTGGACAATTCTATTCTCTATTTGCAGCTATGGCAATTCTCAAAAATATATGGGCAATTATTCTCACTTCAACTTGGTCAAAGGAAAGCTATTGTTGTTACTTCAGCTAAAATTGCCAAAGAGGTACTTAAAAACAATGACCTTGTGTTTTCTAATCGACCTATGTTACTTGCCCAACAGAAATTGTCCTATAATGGGTCTGAGATGATATTTTCCCCATACAATGATTGTTGGAGAGAAATTAGAAAAATTTGCCTTGTTCATGTCTTAAGCTCCAAGCGTGTCCCCTGTTTTTCATCTATAAGAAAATTTGAGGTCAAGCAAATGATCAAAAAGATATCTGGTCATGCTGCTTCTTCAGTTGTTACAAACTTGAGTGAGTTATTGATGTCTCTCTCAAGTACTATAATATGTAGGATTGCTTTTGGGAGAAGGTATGAGGATGAAGGGACTCAAAGGAGTAGGTTCCATGGAATGCTGAATGAGTTTCAAGCCATGATGACTGCCTTCTTTTTTTCTGATTATATTCCATTCATGGGTTGGATTGATAAACTCACAGGTTTGCATGCACGTCTTGAAAGAAATTTCAAGGAGTTGGATAAGTTCTACCAAGATGTCATTGATGATCACATGGATCCAAATTATAGAAACCAAACAGAGGAAGAGGTTATAGTTGATGTCTTGCTTCAACTAAAGAAACAACGTTTGTTTTCAATTGATCTCACTTTCGATCATATCAAAGGTGTCCTCATGGTATGTTGTAGTTCTTTTCTCTCCTTTAATTTTTATTTAATTTTTTGTGAACACCTTAATTTTCTCAATTATTTGTGCTGCGGATCAATTTATTACTTCATGCAAAAAAGTTCTCTTGTACCCAATGATTATATACTTTTGATATGGTGGACCAAGAACATTTCACAACAAATTTACTGTGAATTTTTCATGCATGCTTCATCCTCTAAAAATTCCTAA 1113 0.3549 MTMVSPLLLIICLTLLLCFFKKHRTTNNRAPYPPGPRGLPIIGNLHQLDNSILYLQLWQFSKIYGQLFSLQLGQRKAIVVTSAKIAKEVLKNNDLVFSNRPMLLAQQKLSYNGSEMIFSPYNDCWREIRKICLVHVLSSKRVPCFSSIRKFEVKQMIKKISGHAASSVVTNLSELLMSLSSTIICRIAFGRRYEDEGTQRSRFHGMLNEFQAMMTAFFFSDYIPFMGWIDKLTGLHARLERNFKELDKFYQDVIDDHMDPNYRNQTEEEVIVDVLLQLKKQRLFSIDLTFDHIKGVLMVCCSSFLSFNFYLIFCEHLNFLNYLCCGSIYYFMQKSSLVPNDYILLIWWTKNISQQIYCEFFMHASSSKNS. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10816 370 SUPERFAMILY Cytochrome P450 32 298 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10816 370 Pfam Cytochrome P450 33 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10816 370 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 298 - -
Seca3g10816 370 Gene3D Cytochrome P450 25 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10816 370 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10816 370 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10816 370 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10816 Seca-Chr3 254545513 254546625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10816 7 298 Cytochrome P450 AT4G31500 43.151 6.38e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10816 - - lja:Lj3g3v1475690.1 447.973