Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10813 ATGTTCATATCTTCTCCACATGTTCCACGCTGGCTTCAAGTACTCCTAACTGAGAAGTTCTACAACGCTTGCATAATTCATGAAGGGGTAAGGAAGAATGAAAAGAATGTGTATTGCTTGGATTGTTGCATCAGTCTCTGCCCTCATTGTTTGTCCCCTCACCGTTCTCAGTCTCACAGACTCTTACAGATTAGAAGATATATGTATCAAGATGTTATAAGGTTGGATGATGCTGGAAAGCTAGTTGACTGCACTTCTGTTCAGCACTACAAAACCAACAGTGCAAAAGTAGTATTTTTAAACCAAAGGCCACAACCAAGGAACTTCAAAGGCTCCGGCAATTTCTGCAGCACCTGCGACAGAAGTCTGCAAGACCCATACCAGTTCTGCTCTCTTTCTTGCAAGGTCCTTTTGTCCAAATAA 423 0.4232 MFISSPHVPRWLQVLLTEKFYNACIIHEGVRKNEKNVYCLDCCISLCPHCLSPHRSQSHRLLQIRRYMYQDVIRLDDAGKLVDCTSVQHYKTNSAKVVFLNQRPQPRNFKGSGNFCSTCDRSLQDPYQFCSLSCKVLLSK. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10813 140 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 135 - -
Seca3g10813 140 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10813 Seca-Chr3 254503142 254504557 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca3g10813 PLATZ 2.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10813 - - pvu:PHAVU_008G142900g 251.906