Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10802 ATGGAGAACGCTACATCCTTCCCCGTGAAAACCAAGCAAAAGAAGAATGAGGACAACTATCAAAATCTCAAACCAATCATTATTGGAATCCCTACTGGTAATGATGTTGTTAAGGCCATCATCGAGGTCGCTTGTCGTCATCGTGTTGGTATCACGGTGTTAAGTGGTTCGAGTCCTATCACCGACGTTACCCTTTGCCACCAATTATCCCATACTACTCATACTTTCTATACCATTGGAACCTTCAAGATTATATCTCTTGCTGGCACTTATATGAGTGGGCATTTTCCCCCAATCTCCCTTCCAACCATGCCTTTTCCTCCTTTGTTGTTCGCCTATCAGGACCTATGCCAGGTACTTGGTCGAGTTTTTGGAGGGAACGTTGTGGCTGCAAACAGTGTGGTTTTTGTGGCCTCAATGTTCAAGAAGCTTGAGTAG 438 0.4452 MENATSFPVKTKQKKNEDNYQNLKPIIIGIPTGNDVVKAIIEVACRHRVGITVLSGSSPITDVTLCHQLSHTTHTFYTIGTFKIISLAGTYMSGHFPPISLPTMPFPPLLFAYQDLCQVLGRVFGGNVVAANSVVFVASMFKKLE. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10802 145 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 143 IPR014476 GO:0003680
Seca3g10802 145 ProSiteProfiles PPC domain profile profile. 20 145 IPR005175 -
Seca3g10802 145 Pfam Plants and Prokaryotes Conserved (PCC) domain 24 138 IPR005175 -
Seca3g10802 145 SUPERFAMILY AF0104/ALDC/Ptd012-like 20 140 - -
Seca3g10802 145 Gene3D - 23 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10802 Seca-Chr3 254308549 254309072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10802 17 141 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.331 1.35e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10802 - K03924 lang:109328424 85.8853