Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10799 ATGGAGAGCTCTACATCCTTCCCCATTAAAACCAAGCAAAAGAAGGATGCCATCATCGAGGTCGCTTGTCGTCATCATGTTGGTATCACGGTGCTAAGTGGTTCAGGTTCTGTCACCGACGTTACCCTTTGCCACCCATTATCCCATACTGATCATACTTTCTCTATCATCGGAACCTTCAAAATTATATCTCTTGCTGGCACTTATATGAGTGATCGTTTTCCCCCACTCTCCCATTCCAACCATGCCTATTCCTTCTTTGTCGTTCGACTCTCAGGGCCCTTATGCCAAGTACTTGGGTCAAGTTGTTGGGGGGAAGGTTGTGGCTGCAAGCAGTGTGGTCTTTGTGGCCTCAATGTTCAAGAAGCTTTAGTAGGACCTGGTGCCTTTCATCAACAGAAATGTTAA 408 0.4632 MESSTSFPIKTKQKKDAIIEVACRHHVGITVLSGSGSVTDVTLCHPLSHTDHTFSIIGTFKIISLAGTYMSDRFPPLSHSNHAYSFFVVRLSGPLCQVLGSSCWGEGCGCKQCGLCGLNVQEALVGPGAFHQQKC. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10799 135 Gene3D - 13 108 - -
Seca3g10799 135 Pfam Plants and Prokaryotes Conserved (PCC) domain 16 100 IPR005175 -
Seca3g10799 135 SUPERFAMILY AF0104/ALDC/Ptd012-like 16 100 - -
Seca3g10799 135 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 106 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10799 Seca-Chr3 254301334 254301891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10799 16 100 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.209 1.53e-08 49.7