Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10797 ATGAAGGCCATGCCCTTGCCTTTTCAGGAATTTCAAGGGCAGGGAGTGTTGGATTTCTCTTCTCCCTCAGATTCATTTTCACTGCTTTTGCATCAACCACAAAAGTGGACCAGAGACAAAGAGGATTGCTGTGTGGGCACTGAGCCCACCTCTGTTCTTGACTCCAGAAGAAGCCCAAACCATTCTACTTCCTCATCCACTATGTCCTCCTCCCTTGGCAGCAACACCACCAGCAAGGGTGGTTCCACCACCGGTGCAACCCCAACCGTCTCTCAGAACCCTCCTCGGGAAGCCAGCACAGAAAAATGTGGTATGCGAATGGAGGACTGGGATGGTCAAGATCAATCTATTTTCAGGTTAATCATGAGTGATTTTGAAGACCCATCTGCAGGATTGAGCAAGCTCTTCCAGACCAGTGGCTGCGGGTCTCAAAGTGTTGATTTTAACGGAGGTTTTGGTGTTGTGGATCAAGGGTTGAACATGGTAAGTATCATTGACCCTTCTGTGCCAGGGAATTACCCTGGTTTCCCATTCATTGCTGAAAATATAGATGGTCACAATGCAAAGACTGGTACTGTCTCCGTTGCAGAATCATTTTTTTCTGCTTCTGGTAACAATCCTCTGCTGTCATCATCTCCGGGTATATATAATTCTCAGCAGCAGCAAGGGATTGGAGAAGTAGATGAGAAACCTCAAGTTATTAATCCCCAGTTTCTGTTAAACCAGAACCAAGTTCAATTCTCAGAGAACCCTGCTTTCTCTGTGCCATTAGCATACCCCCAAATGCAAGAGCAGCAAGTTTTCTCTCAGCATCAAGCTAAACGCCCTCTCCTTGACACAATTGGCCAAAATTATCAGGTCCCAAGGTTACCACTTTTGGATTCAGGCCAAGAGGTATTTGCTAGGAGGCAACAAACACAGCTTCCATTGTTTCCTCATCATTTGCTACAACAGCAACCGTTGATTATGCCATCTGCAAAGCAGCAGAAGGTGTGTCCTACCGGAGACGATGCAAGCCACCAGCTTCAGCAGAGTATATTTGATCAGCTGTACAAGGCTGCTGAGATTATAGAAGCTGGCAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCAGCTCTCCCCAATTGGTAAGCCTTTCCAGAGGGCTGCTTTTTACATGAAGGAGGCCTTGCAATCAATGCTTCATTCAAACATTCACAACTTCTTGGCTTTCTCACCCATTAGTTTCATATTCAAAATTGGTGCTTATAAGTCTTTTTCAGAGATATCACCTGTTCTTCAGTTTGCCAACTTTACCTGTAATCAAGCCTTGATTGAAGCTTTGGAAAGATTTGATCGAATTCACATTATTGATTTTGATATCGGGTTTGGAGTGCAGTGGTCATCTTTTATGCAAGAGCTTGCAATGAGGAATAATGGTGTGCCTTCACTTAAAGTCACTGCTGTGGTATCACCCTCCACTTGTGATGAGTTTGAGCTCAATGTCACCCAAGAAAACTTGAATCAATATGCAAGAGACATCAACATGTCATTTGAGCTCAATGTTATTAGCATTGAATCATTGAACACTCCTTCTTGTCCGCTATCTGATCAGTTCTTTGATAATGAGGCAATTGGTGTGAATATGCCACTTTCTTGTTTTGCAAATCATCCATCATTGTTTCCTTCAGCACTTAGATTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTTACTCAGGATAGAAATTGTGATCGAATTGACCTACCATTTTCCACCAATATAGTTCATGCTCTTCAATGTTACTCAGCCTTACTTGAGTCACTTGATGCTGTAAATGTGAACCTAGATGTCCTCCAAAAGATTGAGAGGCATTTTGTCCTTCCATCCATAAAGAAAATCATACTGGGTCACCAACATTCACAGGAAAAATTGTCTCCATGGAGGAACATGTTTCTTCAATATGGGTTCTCTCCATTCACATTTAGTAACTTCACAGAAGCTCAAGCTGAGTGTTTAGTGCAGAGAGCACCTGTTCGAGGATTTCAACTGGATAGAAAGCACTCCTCTCTTGTTCTATGCTGGCAGCGGAAAGAACTTGTCTCAGTTTCAACTTGGAGGTGCTGA 2112 0.4361 MKAMPLPFQEFQGQGVLDFSSPSDSFSLLLHQPQKWTRDKEDCCVGTEPTSVLDSRRSPNHSTSSSTMSSSLGSNTTSKGGSTTGATPTVSQNPPREASTEKCGMRMEDWDGQDQSIFRLIMSDFEDPSAGLSKLFQTSGCGSQSVDFNGGFGVVDQGLNMVSIIDPSVPGNYPGFPFIAENIDGHNAKTGTVSVAESFFSASGNNPLLSSSPGIYNSQQQQGIGEVDEKPQVINPQFLLNQNQVQFSENPAFSVPLAYPQMQEQQVFSQHQAKRPLLDTIGQNYQVPRLPLLDSGQEVFARRQQTQLPLFPHHLLQQQPLIMPSAKQQKVCPTGDDASHQLQQSIFDQLYKAAEIIEAGNPVHAQGILARLNQLSPIGKPFQRAAFYMKEALQSMLHSNIHNFLAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEALERFDRIHIIDFDIGFGVQWSSFMQELAMRNNGVPSLKVTAVVSPSTCDEFELNVTQENLNQYARDINMSFELNVISIESLNTPSCPLSDQFFDNEAIGVNMPLSCFANHPSLFPSALRFVKQLRPKVVVTQDRNCDRIDLPFSTNIVHALQCYSALLESLDAVNVNLDVLQKIERHFVLPSIKKIILGHQHSQEKLSPWRNMFLQYGFSPFTFSNFTEAQAECLVQRAPVRGFQLDRKHSSLVLCWQRKELVSVSTWRC. 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10797 703 ProSiteProfiles GRAS family profile. 337 702 IPR005202 -
Seca3g10797 703 MobiDBLite consensus disorder prediction 51 98 - -
Seca3g10797 703 MobiDBLite consensus disorder prediction 38 102 - -
Seca3g10797 703 Pfam GRAS domain family 348 702 IPR005202 -
Seca3g10797 703 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 297 698 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10797 Seca-Chr3 254287788 254289899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10797 324 703 GRAS Transcription Factor Family AT4G00150 53.906 8.36e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca3g10797 GRAS 8.4e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10797 - - gmx:100801785 1001.12