Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10769 ATGCATTTTGGTGCCTCTTTCTTTCTTCCTTTCTTATTCTGCATGCACACGCCTTCTTTCTCTCTCTGCTCCATACCCCTCTCTCTCTTTCTACTTCTATCTCCGGTCACCGTCGTTTCAAATCTCCGTCCGGTTCTGCTCCTCCGGTCATATTCAGACGACTTTCCAATCGAGACTCGTTTCCCTGCTCCGCCACGCGAATGCAAATCCCAAAGCGCAGCACGCGCGGCGCCTTCTCTTCCTAAAAACCGCCGGCGAACGGAACTGCTCCTCGCAAACTTCCGGCGACGTCGAGTGGAAGCGACGCGAGCTTCGTTCTTCGGTTTGATTTCGGTACAGACACTGGATTGCGCCTCCTGTTTTCGAACTTGTGGAGTGGAGATTGTGGAATTGAAGTTGAAAATGGAGTCAAGAAGTTGCATGAACGTGGCGTGTGCCACCTCAACGTCGATTCGGTGGCGCAAAGGTTGGGCCCTGCGATCCGGTGAATTCGCCGATCTGTGTGATAAGTGCGGTTCTGCTTATGAGCAATCAACATATTGTGATATGTTCCACTCAAACGATTCTGGATGGAGAGAGTGCACTTCATGTGGCAAGCGTCTCCATTGTGGATGTGTTGCTTCTAGGTCTCTGCTTGAACTTCTAGATACTGGTGGCGTCAGCTGTATAAACTGTGCAAGTAATTCAGGACTTCAACCTGCTGCAAGTAATGAAAAGCCTAATGGATCTGGGACATCAAAGATTAAAAATGTCAGTGCACAGCAGTGTGTCTCTCTGGCAAACCAATTAAATGTGAGGGGTATGCAAGCAGGGCAATATGTGGAGAATGATGGGCTGAGGTGCTGGCTCAAACCTCATCATGTTGATACAGAGGGGCATTCTAAGGAAATGAAACCGGAAGTTTTGCCTTCTGTTGGAGAATTAGGAAGCACTTTGATATCACAATTTCATCGTGAATCTAATGGATCATCTAAGACTGCCAAAGCAGAGAACTGTAAGGCAGACACAGACATGCAAGATATATATGAATCGCTGGCACAGACAAATTTGAGTATGGCCCTTGCTTCCCCTTTAGGAAATTCAAATCCCTTTCATAGTGCTGTTGTTAATGAAAGGGAACAAAGTAAGACATCACCTCCACTTTTATTGGGGTCTAGATCTCGCCATCTTTTACCTAAACCCCCTAGGCCAACTCTTGCCCCAGGCTTAGAAGCAAATGCTGGCATGGTATCCCAGATTCGTATAGCAAGGCCTCCTGCTGAAGGACGAGGAAGGAATCAGTTGCTTCCACGTTATTGGCCTAGAATTACAGATCAAGAGTTGCAACAAATATCAGGAGAGTATCCATCATTCTCAAACTCCACCATCGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTACCAAAAGCATGTGCTGAAGTAATTTTTCTTAACTTAGCTGTTGAAGTGACATCTACTGTTGTTATTTTGTATTTACCAATAATTCTACTAAAAGTTATTTTTCTTGATGAGTCTTGTAATTTATTAGAACTAAAAGAGGAGGGCATTGTGCAGGCATATTTCCCTCCTATCTCTCAACCTGAGGGCCTTCCTTTACGAATCCAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCTAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAACCCCCTGCATTCAGTCTATGCAATTGCAAGCTGGAGATACTGGTATATTCTACTGA 1773 0.449 MHFGASFFLPFLFCMHTPSFSLCSIPLSLFLLLSPVTVVSNLRPVLLLRSYSDDFPIETRFPAPPRECKSQSAARAAPSLPKNRRRTELLLANFRRRRVEATRASFFGLISVQTLDCASCFRTCGVEIVELKLKMESRSCMNVACATSTSIRWRKGWALRSGEFADLCDKCGSAYEQSTYCDMFHSNDSGWRECTSCGKRLHCGCVASRSLLELLDTGGVSCINCASNSGLQPAASNEKPNGSGTSKIKNVSAQQCVSLANQLNVRGMQAGQYVENDGLRCWLKPHHVDTEGHSKEMKPEVLPSVGELGSTLISQFHRESNGSSKTAKAENCKADTDMQDIYESLAQTNLSMALASPLGNSNPFHSAVVNEREQSKTSPPLLLGSRSRHLLPKPPRPTLAPGLEANAGMVSQIRIARPPAEGRGRNQLLPRYWPRITDQELQQISGEYPSFSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEVIFLNLAVEVTSTVVILYLPIILLKVIFLDESCNLLELKEEGIVQAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTGIFY. 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10769 590 Gene3D - 434 590 IPR015300 -
Seca3g10769 590 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 137 487 - -
Seca3g10769 590 CDD B3_DNA 458 590 IPR003340 GO:0003677
Seca3g10769 590 SUPERFAMILY DNA-binding pseudobarrel domain 527 589 IPR015300 -
Seca3g10769 590 MobiDBLite consensus disorder prediction 369 395 - -
Seca3g10769 590 Pfam B3 DNA binding domain 460 590 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10769 Seca-Chr3 253893068 253896550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10769 135 589 B3 DNA Binding Superfamily AT4G32010 49.348 3.52e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca3g10769 B3 1.6e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10769 K09287 - gmx:100778833 716.842