Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10768 ATGGACCCTGAGGGAAAACTTATAATGGGGTTCAGGAAGGCAACAAATTCTGCTGCAGTACAGGAAACACTTCCGTCTAATATGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATCTACCTATATTAAGTGGTTACTCTGGCCTTCTTCAGTCACAAAAGGGATGTTCAGAAACCCACCTAAATGCACTGTCCAAAAAATGGAACTCAGCTGGTGGTGACATGAGTTGGCATAATATTGACATGCCTGAAAGCAGGAAAAGAGATGGGTTGCCTTTGCCACCTGTTCTGGCTCCTGAGAAGAAAAGAACTCGGAATATTGGGTCAAAAAGTAAGAGGTTGCTTATTGATAGCCAAGATGCACTGGAGCTGAAACTTACTTGGGAAGAGGCTCAGGATTTGCTTCGTCCACCTCCAACAGTTAAGCCAAGCGTTGTCATGATTGAGGATCATGTATTTGAAGAATATGAAGAACCTCCTGTCTTTGGAAAAAGGAGTATATTTGTGGTACGATCAACTGGGATAAATGAGCAGTGGACACAGTGTGATAGTTGCTCAAAATGGCGAAAGTTGCCAGTTGATGTACTTATTCCCCCTAAGTGGACATGCGTGGAGAATTTATGGGATCAGAGCAGGTGTTCATGTTCTGCTCCCAATGAATTGAACCCGAGGGAACTAGATAATCTACTGAGACTGAACAAGGAATTCAAGAAACAAAGACTAGCAGCATGCCACAGACCAGCCTTGGAACAAGAAAGTTCTGGACTGGATGCTTTGGCAAATGCTGCAATACTTGGAGATGATGCAAGTGGCTCTGGCAGGACACCTGTCGTTACCACTACAAAACACCCCCGGCATAGACCTGGGTGCTCCTGCATTGTCTGTATCCAGCCACCAAGTGGGAAGGGCAAACACAAACCTACATGCACCTGCAATGTGTGCATGACAGTTAAACGTCGGTTTAAAACCCTGATGATGCGAAAGAAGAAGCGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATCAGTTATCATGGAAGGCCAAGGATGAATCAGAAGTAGACAGCAACTCTCGACATTTAACTCTAGTTGATGGTTCTGACAATGAAGCAAGGGTGCCAAATGAGTTGGATTCAAGGAATCAAGACCATGTGACTGAAGCCGCTAAGGGGCAATTAGATTTGAATTGCCAACCTGATCGAGAAGACATGCAAGCTGGGCCAAACACTCTGAGTATGATGAGTCTTCTTGAAGAAGCAAATCTCCCACTGGAGACTTACCTAAAGCAAAACGGTCTTACCAGCTTGATATCAGAGCAGCAAACAAATTCAGCCTCAAATGTGCAGGCACAGACAACCAACGAAAGCGAGGGAAGACATAATGAGAATTGCTATACTACTTCTGCGGTTCAGGAGCAGGAAAGCAGTCCTGAAGAGAACAGTGGGCAAGACAGAGACCAAAACAATTCACTCTCATGA 1500 0.446 MDPEGKLIMGFRKATNSAAVQETLPSNMPNGSHSSETSYSGVYENLPILSGYSGLLQSQKGCSETHLNALSKKWNSAGGDMSWHNIDMPESRKRDGLPLPPVLAPEKKRTRNIGSKSKRLLIDSQDALELKLTWEEAQDLLRPPPTVKPSVVMIEDHVFEEYEEPPVFGKRSIFVVRSTGINEQWTQCDSCSKWRKLPVDVLIPPKWTCVENLWDQSRCSCSAPNELNPRELDNLLRLNKEFKKQRLAACHRPALEQESSGLDALANAAILGDDASGSGRTPVVTTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQLSWKAKDESEVDSNSRHLTLVDGSDNEARVPNELDSRNQDHVTEAAKGQLDLNCQPDREDMQAGPNTLSMMSLLEEANLPLETYLKQNGLTSLISEQQTNSASNVQAQTTNESEGRHNENCYTTSAVQEQESSPEENSGQDRDQNNSLS. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10768 499 MobiDBLite consensus disorder prediction 446 499 - -
Seca3g10768 499 MobiDBLite consensus disorder prediction 352 389 - -
Seca3g10768 499 ProSiteProfiles Zinc finger CW-type profile. 179 229 IPR011124 GO:0008270
Seca3g10768 499 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 453 - -
Seca3g10768 499 Gene3D - 182 238 - -
Seca3g10768 499 Pfam CW-type Zinc Finger 184 226 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10768 Seca-Chr3 253888289 253892484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10768 2 468 B3 DNA Binding Superfamily AT4G32010 44.958 8.68e-125 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10768 K09287 - gmx:100778833 929.087