Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10763 ATGGATGGAGCTATTGAGATAAATCAAGGCAACAACATTTTGTCTTTAGAGTTACAGCAGGCACTTGAAGCCCCATTTGATTTAAATGAAGCCCCATTTGATTTAAATGAGTTGCCATTAGAAGAAGAAAATCTTTCTAATGATTTGGATACAATATTTGAACCATTAGAAGAGGAAAATCCTTCCCATGCTTCGAATATAATATTTGAACCATTTGTTGGTCAATGTTTCTCAAACGAGGAAAAAGCTTTGGAATTTTATCAGAGATATGCTAAGCAACATGGATTTTCAGTTCGAAAGGCTCGCTTTGATAAAAACAAAAATGGAGAAGTTAGAAGGCGTGATTTCTTTTGTCATCGCGCGGGAAGGCAACCACTCAAAATTGTTTACCCATCAAAGGATCAACGACATCGGTCATCGGCACGCTCTGACTGCAAGGCTCATATGCGTATTAAACTTAAAAAATATGTTGATATATTCCCTGATGAATGGCATGTTGTTGAGTTTATTGCCGAACATAACCATGAGTTGCTTTCTGAAGAAGAGACGCGCTTTCTACGATCTCACCGCACCATTACTAAAGAAGATGAAAATTGTATACTTTTGTTGAAAGATGCGGGTCTTTGTGTGCCACAAATTATGCGTGTGATTGGGATAAACAAGTAG 666 0.3754 MDGAIEINQGNNILSLELQQALEAPFDLNEAPFDLNELPLEEENLSNDLDTIFEPLEEENPSHASNIIFEPFVGQCFSNEEKALEFYQRYAKQHGFSVRKARFDKNKNGEVRRRDFFCHRAGRQPLKIVYPSKDQRHRSSARSDCKAHMRIKLKKYVDIFPDEWHVVEFIAEHNHELLSEEETRFLRSHRTITKEDENCILLLKDAGLCVPQIMRVIGINK. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10763 221 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 41 216 - -
Seca3g10763 221 Pfam FAR1 DNA-binding domain 85 178 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10763 Seca-Chr3 253778356 253780268 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g10763 FAR1 2.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10763 - - atri:130810242 195.282