Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10757 ATGTACAAGGGAAGATTAGGAGACAAAGCTCAGTTTGGATATGTTGAAACTGACCCATCTGGGCGATATGGACGTTTCAGGGATATTCTAGGCAAAGGAGCCGTGAAGGTAGTGTATAGAGCATTTGATGAGGTCCTAGGAATAGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCATTCACCAGACCAACTTCAGCGCCTATATGCAGAGGTTCATCTCCTCAAGAACTTGGACCATGACTCTATCATCACCTTCCATGATTCTTGGATCGATGCCAGTTGTAGAACCTTCAACTTCATCACTGAATTATTCACCTCTGGCACCTTAAGAGATGAAGAGGGGAAGCTGCCAGAAGCATTTTATAGAATCCATGATTTGGAAGCCCAGAGGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGGTTATCAGCAAAGGAGCTCTTGTTAGACCCATTTTTAGCCACAGACCAACTTGGCTCGCCCTTGCCAAGCCCAACATTACCTAGAAAACATACTCCTACACTCAATTTCACTGATGCAGTTGAGAAAGAGAAAACTTCATTAAGTGACCACACAAAGAGCACATACATGACAATCACTGGATCAATAAATAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAACTGGGCTCACGAGAAATATATACTTCCCATTCAACACCATAAATGACACTGCTATTGAGGTGGCAATGGAGATGGTTAAAGAACTCGAAATCAGTGACTTGGAACCATTGGAGATTGCTGAAATGATAGAGGAGGAGATATCAGCTTTAGTTCCAACATGGAAGGATTGGGGCAATTCAAAGTATCAAAGACAATATAGTTTTAACTATGAAGAAGAGGATGATATCAGTAACCACCATCCTTTCTTCTCATCCTCTTCTCGCTCTTCCTCTCATGGTTCTCTCCCAATGTTTGGTTCTTCCTACAAGAACAACATCCATCTTTGTGGGAACCATTACCCTCTTGCTCAAGATTGGTCTCAAGATGATCTATTTATGAATGATGATGAAAGCTCTCAAAGCTCAATGAACTCCTTGAAGTGTTTCAATTTCCATTGCTGCGACTCAGGAAATGAAGATGAGCATCATCCAACACTAGTAGTAGGAGCAGAACCACTTAGCTTCACACCAAAGGCCAACAAAATGAGCACAAGATTCTGTCCTCGAGAAGAGGCTGATTTCATCAAACAGTTTTACAACATGAGAATGGATTCTCACTCTCACATGTGTCATGGATCAGGGCATGGATATAAGAGGCTGACAAGGATTCGTTCCTATGTGGATGTGAGGAGACAGCAACTGCAAAGATCACTGATGGAGGAGATGCACAAGAAAAGGATGTTCAAGACGGTTGGTACCATTCAGAACATTGGGTTTCAGAATCCAGAAGGAGATGGATGTTTTTCTTGTTGA 1464 0.4187 MYKGRLGDKAQFGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDQLQRLYAEVHLLKNLDHDSIITFHDSWIDASCRTFNFITELFTSGTLRDEEGKLPEAFYRIHDLEAQRFVGKCLANVSERLSAKELLLDPFLATDQLGSPLPSPTLPRKHTPTLNFTDAVEKEKTSLSDHTKSTYMTITGSINNEEDDTVFLKVQISNKTGLTRNIYFPFNTINDTAIEVAMEMVKELEISDLEPLEIAEMIEEEISALVPTWKDWGNSKYQRQYSFNYEEEDDISNHHPFFSSSSRSSSHGSLPMFGSSYKNNIHLCGNHYPLAQDWSQDDLFMNDDESSQSSMNSLKCFNFHCCDSGNEDEHHPTLVVGAEPLSFTPKANKMSTRFCPREEADFIKQFYNMRMDSHSHMCHGSGHGYKRLTRIRSYVDVRRQQLQRSLMEEMHKKRMFKTVGTIQNIGFQNPEGDGCFSC. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10757 487 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Seca3g10757 487 FunFam Probable serine/threonine-protein kinase WNK1 8 105 - -
Seca3g10757 487 SUPERFAMILY Protein kinase-like (PK-like) 22 121 IPR011009 -
Seca3g10757 487 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 114 - -
Seca3g10757 487 SMART serkin_6 24 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10757 Seca-Chr3 253660989 253665043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10757 117 479 MAP Kinase Kinase Kinase AT5G58350 39.024 3.27e-57 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10757 K08867 - gmx:100816187 550.051