Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10743 ATGGCCTCGCAATCGCATGTGTATTTCTCTGCTTTCCTCTATGCCTTTGTGTTTGCAACCACAGGTTTCTCACAACTGTCACCTAATTACTATGACTACACGTGTCCAAATGCTCTGAGCACCATTAAAAGAGTCGTGGAGAGTGCCGTGTGGAAAGAGCCCCGTATGGGTGCTTCTTTGCTACGATTGCACTTCCATGATTGCTTTGTTAATGGTTGTGACGGTTCACTCCTTCTAGACTCTACATCCTCCATTGACAGTGAAAAGTTGTCAAATGCTAATAAACAGTCAGCCAGAGGATTTGAAGTGGTGGATGAGATCAAAAAGGCCGTGGATGAAGCATGTGGAAAACCTGTTGTTTCTTGCGCTGACATCTTAGCCGTTGCCGCACGAGACTCTGTAGTTGCCTTAGGGGGGCCAACATGGAAGGTGAGAGTGGGGAGAAGAGACTCCACCACAGCAAGCCGTGCTGCTGCAGATGCGAACATTCCAGCACCGTTTTTCAGCTTTTCTCAACTTATTGACAACTTCAAGAGCCATGGTCTAGATGAGAAGGACCTCGTGGTTCTTTCTGGGGCCCACAGCATTGGATATGCACGTTGTGTTACGTTTAGGGACCGTATCTACAATGACTCTAACATCAATTCCCACTTTGCACAACAACTTAAGTACATTTGCCCCAGAAATGGAGGTGACTCCAACCTTGCTCCTTTGGACCCCACAGCCGCGCGCTTTGACACAGCCTACTACTCTAATTTAGTGAAAGAGAGAGGGCTTCTTCACTCTGATCAGGAACTCTACAATGATGAATCTACAAATGAACTTGTTAAAGAGTACAGCGACGATACCCAAGATTTCTACGAGGACTTCGCCAACTCCATGATTAAGATGGGAAATATGCAGCCCCTCACTGGGAATCAAGGTGAAATACGTGTTAACTGCAGGAGAATCAATTATTAG 960 0.4625 MASQSHVYFSAFLYAFVFATTGFSQLSPNYYDYTCPNALSTIKRVVESAVWKEPRMGASLLRLHFHDCFVNGCDGSLLLDSTSSIDSEKLSNANKQSARGFEVVDEIKKAVDEACGKPVVSCADILAVAARDSVVALGGPTWKVRVGRRDSTTASRAAADANIPAPFFSFSQLIDNFKSHGLDEKDLVVLSGAHSIGYARCVTFRDRIYNDSNINSHFAQQLKYICPRNGGDSNLAPLDPTAARFDTAYYSNLVKERGLLHSDQELYNDESTNELVKEYSDDTQDFYEDFANSMIKMGNMQPLTGNQGEIRVNCRRINY. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10743 319 FunFam Peroxidase 29 168 - -
Seca3g10743 319 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601|GO:0042744
Seca3g10743 319 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 Gene3D - 29 315 - -
Seca3g10743 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Seca3g10743 319 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca3g10743 319 ProSiteProfiles Plant heme peroxidase family profile. 25 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 FunFam Peroxidase 164 297 - -
Seca3g10743 319 PANTHER PEROXIDASE 72-RELATED 24 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g10743 319 Gene3D Peroxidase, domain 2 164 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10743 Seca-Chr3 253495237 253496672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10743 24 318 Peroxidase AT5G05340 59.732 9.17e-128 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10743 K00430 - gmx:100790910 500.36