Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10741 ATGCATGTTCAGTCATTTCATAATAGAATGGCATCGCATGGATATTTCTATGCTAATTTCCTCTATGCCTTTGTGTTTGCAAGTCTTGCAACAACTTCTTTCTCACAACTGTCACCTAATTACTATGGCTACACCTGCCCTAATGCTTTGAGCACCATTAAAACAGTCGTGGAGGGTGCCGTGTGGAAAGAGCCCCGAATGGGTGCTTCTTTGCTACGATTGCACTTCCATGATTGCTTTGTTAACGGTTGTGATGGTTCAATCCTTCTAGACTCTACATCCTCCTTTGACAGTGAAAAGAATGCAGGTCCTAATTTTCAGTCAGCTAGAGGATTTGAAGTGGTGGATGAGATCAAGAAGGCTGTGGACGAAGCATGTGGAAGACCAATTGTTTCTTGCGCTGACATTTTGGCTATTGCTGCTCGAGACTCTGTAGTTGCGTTAGGAGGCCCCACATGGGAAGTGCAACTAGGGAGAAGAGATTCCACGACAGCAAGCCGTGATGCTGCAAATAAAGACATTCCAGCACCATTTTTCAGCCTTTCTCAACTTATCGACATCTTCAAGAGCCATGGTCTAGATGAGAAGGATCTGGTGGTTCTCTCTGGAGCCCACACGATTGGATTTTCACGTTGTGCTACGTTTAGGGACCGTATCTACAATGACACTGACATCAATCCTTTCTTTGCACGATCGCTTAGATACTTATGTCCGAGAATTGGAATGGACTCTAACCTTGCTCCTTTGGACCCAACAGCTGCGAAGTTTGACGCAGCCTACTTCTGTGATTTAGTTCAAATGAAAGGGGTTTTTCACTCGGATCAGGAACTCTTCAATGGTGGTTCTACTGATGCACTTGTTAGACAGTACAGCTACGATATCGTAGCTTTCTTCCAGGAATTCGCGAACTCGATGATTAAGTTGGGAAATATTCAGCCCCTCATTGGGAATCAAGGTGAAATACGTGTTAATTGCAGATCACACATGGCCTCGAACGGGTATATCTCTGTTTTCTTCCATGCCTTTGTGTTTGCATCTCTTGCAACCACAGGTTTCTCACAACTGTCACCTAATTACTATGACTACACGTGTCCTAACGCTTTGAGCACCATTAAAAGTGTCGTGGAGGGTGCAGTGTGGAAAGAGCGCCGTATGGGCGCGTCTTTGCTACGATTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATACTTCTAGATCCGACATCGTCCATTGACAGCGAGAAGAATGCAGGGCCTAATTTCCAATCTGCTAGAGGATTTGAAGTGGTGGATGATATCAAGAAGGCTGTGGATGCAGCATGTGGAAAACCAGTTGTTTCTTGCGCTGACATTTTGGCCGTTGCTGCTCGTGACTCTGTAGTTGCGTTAGGGGGACCAACATGGGAGGTGCAATTGGGGAGAAGAGACTCGACCACAGCAAGCCGTGATGCTGCAAATAAAGACATTCCAGCACCATTTTTCAGCCTCCCTCAACTTATTGAGAGTTTCAAGAACAAAGGTCTAGATGAGAAGGATCTGGTGGTTCTTTCTGGAGGACACACGATTGGATATGCACGTTGTGCCACGTTTAGGGACCGTATCTACAAGGACACTGACATCAATTCTGAGTTTGCACAACAGCTTAAGTACATCTGCCCCATAAATGGAGGTGACTCAAACCTTTCTCCTTTGGACCCAACAGCAGCGAACTTTGACGTAGCTTACTACTCTAATTTACTTCAAACGAAAGGGCTTCTTCACTCTGATCAGGAACTCTTCAACGGTGGTTCCACAGATGAACTTGTTAAACAGTACAGCTACTATCCCGAAGCTTTCTTCCAAGACTTCGCCAAATCGATGATTAAGATGGGAAATATTCAGCCCCTCACTGGGGATCAAGGTGAAGTACGTGTTGACTGCAGGAAAGTCAACTACTACTAG 1950 0.4518 MHVQSFHNRMASHGYFYANFLYAFVFASLATTSFSQLSPNYYGYTCPNALSTIKTVVEGAVWKEPRMGASLLRLHFHDCFVNGCDGSILLDSTSSFDSEKNAGPNFQSARGFEVVDEIKKAVDEACGRPIVSCADILAIAARDSVVALGGPTWEVQLGRRDSTTASRDAANKDIPAPFFSLSQLIDIFKSHGLDEKDLVVLSGAHTIGFSRCATFRDRIYNDTDINPFFARSLRYLCPRIGMDSNLAPLDPTAAKFDAAYFCDLVQMKGVFHSDQELFNGGSTDALVRQYSYDIVAFFQEFANSMIKLGNIQPLIGNQGEIRVNCRSHMASNGYISVFFHAFVFASLATTGFSQLSPNYYDYTCPNALSTIKSVVEGAVWKERRMGASLLRLHFHDCFVNGCDGSILLDPTSSIDSEKNAGPNFQSARGFEVVDDIKKAVDAACGKPVVSCADILAVAARDSVVALGGPTWEVQLGRRDSTTASRDAANKDIPAPFFSLPQLIESFKNKGLDEKDLVVLSGGHTIGYARCATFRDRIYKDTDINSEFAQQLKYICPINGGDSNLSPLDPTAANFDVAYYSNLLQTKGLLHSDQELFNGGSTDELVKQYSYYPEAFFQDFAKSMIKMGNIQPLTGDQGEVRVDCRKVNYY. 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10741 649 PANTHER PEROXIDASE 72-RELATED 353 646 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 FunFam Peroxidase 40 181 - -
Seca3g10741 649 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Seca3g10741 649 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Seca3g10741 649 CDD secretory_peroxidase 36 326 IPR033905 GO:0004601|GO:0042744
Seca3g10741 649 Gene3D Peroxidase, domain 2 493 626 - -
Seca3g10741 649 Gene3D - 40 326 - -
Seca3g10741 649 FunFam Peroxidase 493 626 - -
Seca3g10741 649 ProSitePatterns Peroxidases proximal heme-ligand signature. 515 525 IPR019793 -
Seca3g10741 649 ProSitePatterns Peroxidases active site signature. 386 397 IPR019794 GO:0004601
Seca3g10741 649 PRINTS Haem peroxidase superfamily signature 515 530 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Haem peroxidase superfamily signature 467 479 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Haem peroxidase superfamily signature 567 582 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Haem peroxidase superfamily signature 386 400 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Haem peroxidase superfamily signature 449 466 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 ProSiteProfiles Plant heme peroxidase family profile. 36 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 FunFam Peroxidase 358 497 - -
Seca3g10741 649 CDD secretory_peroxidase 354 646 IPR033905 GO:0004601|GO:0042744
Seca3g10741 649 Pfam Peroxidase 372 609 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 Pfam Peroxidase 55 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 SUPERFAMILY Heme-dependent peroxidases 36 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 ProSiteProfiles Plant heme peroxidase family profile. 354 647 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 SUPERFAMILY Heme-dependent peroxidases 354 647 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 581 598 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 448 458 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 621 634 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 428 441 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 364 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 467 482 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 565 580 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 514 526 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 PRINTS Plant peroxidase signature 388 408 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10741 649 Gene3D - 358 647 - -
Seca3g10741 649 FunFam Peroxidase 175 308 - -
Seca3g10741 649 Gene3D Peroxidase, domain 2 175 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10741 Seca-Chr3 253469625 253477471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10741 329 647 Peroxidase AT5G05340 57.231 1.64e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10741 K00430 - vvi:100232945 725.702