Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10740 ATGAACACCCTTTCCAACAACGACAATTATGAGGAAGTGTTAAAATCGATCATATTTGAAATTTGTGTTGGCAATGACATTGTTCAGCCCATCATCGAGTATGCTTGTCATCGTCGTGTTGCCATAGTAATGCTAACTGGTTCAGGTTCTATTTCTGAGGCTACCCTTCTCCATCCCATGACCCATACTGCTCCTGCTTTGTCTATCACTAGACACTTCAACATTGTGTTCGATGGAATTGTTGGAGGAAGAGTTATAGTTGCGAGTCATGTGGTTGTTATGGCATCAACATTCAAGAAGTTTGAGTACCACATTGTTCCTTGA 324 0.4105 MNTLSNNDNYEEVLKSIIFEICVGNDIVQPIIEYACHRRVAIVMLTGSGSISEATLLHPMTHTAPALSITRHFNIVFDGIVGGRVIVASHVVVMASTFKKFEYHIVP. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10740 107 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 75 IPR014476 GO:0003680
Seca3g10740 107 SUPERFAMILY AF0104/ALDC/Ptd012-like 14 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10740 Seca-Chr3 253465553 253465981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10740 11 107 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 24.060 3.14e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10740 - - qlo:115982981 75.485