Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10737 ATGGCTGAAGATGGGCGTATACTCTCTCCGTCCATTGCCTTGGTGAATAACTCCTCAAAGCTCAACTCAGAGAGTTTTGACACTTTCTACAACAACTCCTCTGTCATAGGTGGTGCAAGCAGCGAATACAAGATCTCCCTCTCCAACAACGACAATTATGAGGAAGTGTCAAAATCAGTCATCTTTGAAATCCCTGCTGGAAATGACATTGTTCAGCCCATCATCGAGTATGCTTGTCGTCGTCGTGTTGGCATCGTAGTGCTATCTGGTTCAGGTTTTGTTTCCGATGTTACCCTTCTCCACCCCATGACCCATATTGCTCCCTTGTCTATCACCAGACGCTTCAACATTATATCTTTCACAGGAACTTACATGGGTGGTCATTTTCCTCCACTCCCATCTCCCACCCCTGCTTGTTCTTCTTTTGTGATTAACCTCTCAAGCTTCCCAAGTCAGGTGTTCTGTGGACTTGTTGGAGGAAGGCTTATAGCTGCGAGTCGTGTTGTTGTTGTGGTATCAACATTCAAGAAGTTTGAGTACCACATTGTTCCTGGAATTACTGAGGAAGATGAAGAGGGTGACCTCACAAATATTGGGGCCATTAATGCTGATTCAAGTGATGCTAATGGCATCACCGACAACACCGACATTGCCATGACTAATAATGTGTCTTCTTCCGGTATGACCAATTTAACCTCACTGAATCACCAACTCCCTTTTCCATAA 726 0.4477 MAEDGRILSPSIALVNNSSKLNSESFDTFYNNSSVIGGASSEYKISLSNNDNYEEVSKSVIFEIPAGNDIVQPIIEYACRRRVGIVVLSGSGFVSDVTLLHPMTHIAPLSITRRFNIISFTGTYMGGHFPPLPSPTPACSSFVINLSSFPSQVFCGLVGGRLIAASRVVVVVSTFKKFEYHIVPGITEEDEEGDLTNIGAINADSSDANGITDNTDIAMTNNVSSSGMTNLTSLNHQLPFP. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10737 241 ProSiteProfiles PPC domain profile profile. 54 196 IPR005175 -
Seca3g10737 241 Pfam Plants and Prokaryotes Conserved (PCC) domain 59 176 IPR005175 -
Seca3g10737 241 Gene3D - 57 189 - -
Seca3g10737 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 56 197 IPR014476 GO:0003680
Seca3g10737 241 CDD DUF296 61 164 IPR005175 -
Seca3g10737 241 SUPERFAMILY AF0104/ALDC/Ptd012-like 58 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10737 Seca-Chr3 253395514 253396239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10737 61 210 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.333 1.31e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10737 - - cave:132164508 119.012