Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10736 ATGGCTGAAGATGGGCGTATACTCTCTCCGTCCATTGCCTTGGTGAATAACTCCTCAAAGCTCAGCTCAGAGAGTTTTGACACTTTCTACAACAACTCCTCTGTCATAGGTGGTGCAAGTAGCGAATACAAGATCTCCCTCTCAAACAACGACAATTATGAGGAAGTGTCAAAATCAGTCATCTTTGAAATCCCTGCTGGAAATGACATTGTTCAGCCCATCATCGAGTATGCTTGTCTTCGTCGTGTTGGCATCGTAGTGCTATCTGGTTCAGGTTTTGTTTCCGATGTTACCCTTCTCCACCCCATGACCCATATTGCTCCCTTGTCTATCACCGGACGCTTCAACATTATATCTTTCAAAGGAACTTACATGGGTGGTCATTTTCCTCCACTCCCATCTCCCACCCCTGCCTGTTCTTCTTTTGTGATTAACCTCTCAAACTTCCCAACTCAGGTGTTCTGTGGACTTGTTGGAGGAAGGGTTATAACTGCGAGTCGTGTTGTTGTTGTGGCATCAACATTCAAGAAGTTTGAGTACCATATTGTTCCTGGAATTACTGAGGAAGATGAAGAGGGTGACCTCACAAATATTGGGGCCATTAATGCTGATGCAAGTGATGCTAACGGCATCACCGACAACACCGACATTGCCATGAATAATAATGTGTCTTCTTCCGGTATGACCAATTTAACCTCACTGAATCACCAACTCCTTTTTCCATAA 726 0.4435 MAEDGRILSPSIALVNNSSKLSSESFDTFYNNSSVIGGASSEYKISLSNNDNYEEVSKSVIFEIPAGNDIVQPIIEYACLRRVGIVVLSGSGFVSDVTLLHPMTHIAPLSITGRFNIISFKGTYMGGHFPPLPSPTPACSSFVINLSNFPTQVFCGLVGGRVITASRVVVVASTFKKFEYHIVPGITEEDEEGDLTNIGAINADASDANGITDNTDIAMNNNVSSSGMTNLTSLNHQLLFP. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10736 241 CDD DUF296 61 175 IPR005175 -
Seca3g10736 241 Gene3D - 57 190 - -
Seca3g10736 241 ProSiteProfiles PPC domain profile profile. 54 196 IPR005175 -
Seca3g10736 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 56 197 IPR014476 GO:0003680
Seca3g10736 241 Pfam Plants and Prokaryotes Conserved (PCC) domain 59 176 IPR005175 -
Seca3g10736 241 SUPERFAMILY AF0104/ALDC/Ptd012-like 58 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10736 Seca-Chr3 253394196 253394921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10736 61 229 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 30.286 3.43e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10736 - - cam:101511090 123.25