Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10732 ATGGCTGCAAGGGTGACTTTTCCCAACTTCAGGTTCAGAATCTGTTTATTCATATGTGTTATTGGGATAGCCTCAGCTATAGATTTAACTTCTTCAACTAATTTACCTCATCCAACTAATCAGTTAAGTCCTAGTTACTATTATAATACAAACTGTCCCTTGGCCCTTCTTACCATTAAGACAATGGTAACCGCTGCTGTGTTGAAAGAGCCTCGCATGGGTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGGTGTGATGCATCGGTACTGTTGAAGGACACAGCAAGTTTCACGGGCGAACAAAATGCCTTTCCCAATGTTAATTCTCTAAGGGGTTTCGATGTCATAGACAACATCAAAGCTAAACTAGAGACATTGTGTCCTGGTGTTGTCTCTTGTGCCGACATCGTTGCGGTTGCTGCAAGGGATTCTGTTGCTGCTCTTGGTGGACCAAGTTGGTTAGTTCGCTTGGGCAGAAGAGACTCAACAACTGCAAGTTTAAGTGCTGCTAACTCAGATTTACCTTCTCCCTTTCTCGATCTTAATGGCCTTATTGCTGCTTTCAAGAAAAAGAATTTCTCAGTCAATGAAATGGTTGCTTTATCAGATAAATTTGTTGTTGGATCAGGTGCTCACACAATAGGCAGAGGTAGATGTTCACTCTTCCGAACAAGGATCTACAATGAAAGCAACATAGATCCCTCATTTGCAAAATTAATGCAAGCAAATTGTCCCAGGAATGGTGGTGACGGCAACTTATCTCCTTTAGACATTACCACTCCAGACTTTTTTGACAGTGCTTATTATAGGAATTTAGTGAACAAAAAGGGTCTCTTTCACTCTGATCAACAACTCTTCAATGGTGGTTCCACGGACTCTAAAGTTTCAGAATACGCCAGGTACCCATTCCTCTTCAGATCAGATTTTGCTAACGCCATGGTCAAGATGGGTAACCTTAGCCCACTAACCGGGACACAGGGTCAGATCAGAGGTATCTCACAATTGTCACCAAATTACTATGACTACACGTGTCCTAATGCTCTGAGCACCATTAAAAGAGTCGTGGAGAGTGCCGTTTGGAAAGAGCCCCGAATGGGTGCTTCTTTGCTGCGATTGCACTTCCATGATTGCTTTGTTAATATCAAGAAGGCTGTGGATGCAGCATGTGGAAAACCAGTTGTTTCTTGCGCTGACATCTTGGCTGTTGCTGCTCGTGACTCTGTAGTTGCGTTAGGGGGGCCAAAATGGAAGGTGAGAGTTGGGAGAAGAGACTCAACCACAGCAAGCCGTGCTGCTGCAAATGCTAACATTCCAGCACCGTTTTTCAGCCTTTCTCAACTTATCGACAACTTCAAGAAACATGGCTTAAATGAGAAGGACCTGGTGGCTCTTTCTGGAGCACACACAATTGGATTTGCACGTTGTGCTACGTTTAGGGACCGTATCTATAATGACTCTAACATCAATCCTTACTTTGCAAAAACGCTTAAACACATTTGCCCCAGAAAAGGAGGTGATTTCAACCTTGCTCCTTTGGACACAACACCAGCACACTTTGATAAAGCCTACTTCTCTGATTTGGTTCAAAAGAAAGGGGTTCTTCACTCTGATCAGGAACTCTTCAATGGTGGTTCTACTGATGCTTTGGTTAGAAAATATAGCCACGATACCAAAACTTTCTACAAGGACTTTGTAAAATCTATGATTAAGATGGGAAATATAAAGCCCCTCACTGGATATCAAGGTGAAATTCGTCTCAACTGCAGGAAAGTGAACTAA 1794 0.4292 MAARVTFPNFRFRICLFICVIGIASAIDLTSSTNLPHPTNQLSPSYYYNTNCPLALLTIKTMVTAAVLKEPRMGASLLRLHFHDCFVQGCDASVLLKDTASFTGEQNAFPNVNSLRGFDVIDNIKAKLETLCPGVVSCADIVAVAARDSVAALGGPSWLVRLGRRDSTTASLSAANSDLPSPFLDLNGLIAAFKKKNFSVNEMVALSDKFVVGSGAHTIGRGRCSLFRTRIYNESNIDPSFAKLMQANCPRNGGDGNLSPLDITTPDFFDSAYYRNLVNKKGLFHSDQQLFNGGSTDSKVSEYARYPFLFRSDFANAMVKMGNLSPLTGTQGQIRGISQLSPNYYDYTCPNALSTIKRVVESAVWKEPRMGASLLRLHFHDCFVNIKKAVDAACGKPVVSCADILAVAARDSVVALGGPKWKVRVGRRDSTTASRAAANANIPAPFFSLSQLIDNFKKHGLNEKDLVALSGAHTIGFARCATFRDRIYNDSNINPYFAKTLKHICPRKGGDFNLAPLDTTPAHFDKAYFSDLVQKKGVLHSDQELFNGGSTDALVRKYSHDTKTFYKDFVKSMIKMGNIKPLTGYQGEIRLNCRKVN. 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10732 597 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 Gene3D - 340 385 - -
Seca3g10732 597 Gene3D - 47 335 - -
Seca3g10732 597 PANTHER PEROXIDASE 72-RELATED 339 385 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 ProSitePatterns Peroxidases proximal heme-ligand signature. 465 475 IPR019793 -
Seca3g10732 597 Gene3D Peroxidase, domain 2 180 321 - -
Seca3g10732 597 FunFam Peroxidase 46 187 - -
Seca3g10732 597 Gene3D Peroxidase, domain 2 443 576 - -
Seca3g10732 597 FunFam Peroxidase 180 321 - -
Seca3g10732 597 SUPERFAMILY Heme-dependent peroxidases 339 597 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 CDD secretory_peroxidase 339 596 IPR033905 GO:0004601|GO:0042744
Seca3g10732 597 SUPERFAMILY Heme-dependent peroxidases 46 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 Gene3D - 386 597 - -
Seca3g10732 597 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Seca3g10732 597 ProSitePatterns Peroxidases active site signature. 371 382 IPR019794 GO:0004601
Seca3g10732 597 CDD secretory_peroxidase 41 335 IPR033905 GO:0004601|GO:0042744
Seca3g10732 597 ProSiteProfiles Plant heme peroxidase family profile. 339 597 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Haem peroxidase superfamily signature 465 480 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Haem peroxidase superfamily signature 399 416 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Haem peroxidase superfamily signature 517 532 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Haem peroxidase superfamily signature 371 385 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 PRINTS Haem peroxidase superfamily signature 417 429 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 ProSiteProfiles Plant heme peroxidase family profile. 41 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 FunFam Peroxidase 443 576 - -
Seca3g10732 597 Pfam Peroxidase 61 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g10732 597 Pfam Peroxidase 386 560 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10732 Seca-Chr3 253369439 253375148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10732 338 597 Peroxidase AT5G05340 55.705 1.06e-105 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10732 K00430 - gmx:100811432 446.432