Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10699 ATGGGAGCGTGTTGCAGCTGCCAAGTTTCATTTGTAGGAAAGGTGCATGATGAACAATATGAATCAAACCATAACAATGACACTGCATATGAACATGGTGGGGCCCGGGTCTTGTTGAGAGGAGCCTCTAACTTTGTATCAATGTACAGCCAAAGGGGTACAAAAGGAGTTAATCAAGATGCATTGACAGTTTGGGAGGACTTCACTGGAGAAAAAGACATGATCTTTTGTGGTGTGTTTGATGGTCATGGTCCTCTAGGACACAAGTTTTCACACTGTATACGTGAAAATCTACCCTCCAAACTCTCTTCAGCAATCAAACTCACACAAGAAAGGGTTTGCAAACACTATGATGCTAATGTTGCAAACACAGACAGTAATGATGATGTCTATGATGATGAGGATAACCAACACTTGTCCTTTGCTTCATGGGAGGGATACTTCCTGAGGTCCTTCAAAGAAATGGATCAATACCTTGCTAGTAACATTGACACTGATGGTTATTGTGGTGGTAGCACTGCTGTAACTGTAATTAAACAGGGTGATCAGCTGATAGTTGGTAATTTGGGGGATTCTCGTGCAGTTCTTTGCACAAGAGCAGATGACAACCAGCTTATTCCTGTTCCACTTACTGTTGATTTGAACCCAGATATTCCAACTGAAGCTTCAAGGATCATCAAATGTGGAGGTAGAGTTTTTGCTGCAGAAGAAGATCCGGGTGTAAACAGAATGTGGATGCCTGAAGGTGACTGCCCTGGATTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTAAAAGACTATGGCCTCTCCTCAGTTCCTGATGTATCTTATAGAACACTTACCAAAAGGGATGAATTTGTGGTTTTGGCTAGTGATGGGATATGGGATGTGCTGACAAACAATGAAGTGATAAACATAGTTGCTTCAGCACCAAAGAGGTCCATGGCAGCCAAATTGTTAGTAAAGCGTGCTGTTCAGGCTTGGAAATGCAAGAATCCTTGTTACCATGTTGATGATTGTACAGCCATATGCTTGTTCCTCAATGATGAGCCTGTTTTAACCCATTCCCAGTCCAATGTGAGAGGAAATAATAGACATCACAGGAAGCACCTGCATTGCTCTTGA 1128 0.4238 MGACCSCQVSFVGKVHDEQYESNHNNDTAYEHGGARVLLRGASNFVSMYSQRGTKGVNQDALTVWEDFTGEKDMIFCGVFDGHGPLGHKFSHCIRENLPSKLSSAIKLTQERVCKHYDANVANTDSNDDVYDDEDNQHLSFASWEGYFLRSFKEMDQYLASNIDTDGYCGGSTAVTVIKQGDQLIVGNLGDSRAVLCTRADDNQLIPVPLTVDLNPDIPTEASRIIKCGGRVFAAEEDPGVNRMWMPEGDCPGLAMSRAFGDFCLKDYGLSSVPDVSYRTLTKRDEFVVLASDGIWDVLTNNEVINIVASAPKRSMAAKLLVKRAVQAWKCKNPCYHVDDCTAICLFLNDEPVLTHSQSNVRGNNRHHRKHLHCS. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10699 375 Pfam Protein phosphatase 2C 74 327 IPR001932 -
Seca3g10699 375 ProSiteProfiles PPM-type phosphatase domain profile. 45 348 IPR001932 -
Seca3g10699 375 SUPERFAMILY PP2C-like 43 350 IPR036457 -
Seca3g10699 375 CDD PP2Cc 44 348 IPR001932 -
Seca3g10699 375 PANTHER PROTEIN PHOSPHATASE 43 346 IPR015655 GO:0004722|GO:0006470
Seca3g10699 375 Gene3D - 41 350 IPR036457 -
Seca3g10699 375 SMART PP2C_4 36 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10699 Seca-Chr3 252903640 252905851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10699 1 352 PP2C-type Phosphatase Gene Family AT5G01700 48.889 1.25e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10699 - - cam:101501265 528.48