Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10659 ATGGCAATGGAAGTTACTCAAGTTCTTTTGAATGCTCAATCCATTGATGGAACTGTACGGAAGCATGCCGAAGAAAGTCTGCGACAATTTCAGGAGCAAAACCTTCCTGGTTTCTTGGTCTCTCTCTCTGGAGAGTTAGCAAGTGAAGATAAGCCAGTTGATAGCCGAAAGTTGGCAGCTACTCAAGTTATTGCTAAAGTTGCTGGAATTGAGCTTCCTCAGAAACAGTGGCCTGAGCTGATAGGATCGCTTTTATCAAATATTCACCAAGTTCCATCTCATGTCAAGCAAGCAACTTTGGAGACTCTGGGGTATTTGTGTGAGGAAGTCTCTCCTCAGTTGGAAGGACTAAGTCTAAGATCATTAGGAGAATATGCATACCCTTCCAAAGCATGTCAAAGCAAGGTTCCTTTGCTTGTTTACTTCCACGGTGGTGGATTCCGTGTTGGCTCTGCTTCTTGGAGCTGTTACCATGAGTTCTTGACCAATCTTCCAAAGCAAATTGTGTCATTGTCTCTGTGGAGTACCATTTGGCCCCTGAGAACCCTCTTCCTTCTGCATATGATGATGAAAGGAACTAATGAGATAACTACAAGATGGACCGTGGTTATGAGATTCGCGTTACTTCCCTGGAAACCAGAATTGGTCTTCACTGGAACCTCTGTTATGGGCATTAACCCAGAAAATGGCAAGTTTTGTAGCCATGTGGACTGTTGGGATTCAATAGAGAAAAATGACTACTTTTCTCTTGAAGGATGCACCCTTGGTTATGCAATAGCAGCTATTTTGGGTTACTTGATGTTTGGTGAAGAGGTTGAATCACAGGTGACTTTGAATCTCCAAACAGGCAAGTTGAGTTCACGCATGGCAATATACACAACCTTGGGGATATTTGTTTTGGAAGACCGAGTTTTCATGTCAGTGGAGATGGATGAAAGTTGTGAGGTGACTTGA 954 0.4319 MAMEVTQVLLNAQSIDGTVRKHAEESLRQFQEQNLPGFLVSLSGELASEDKPVDSRKLAATQVIAKVAGIELPQKQWPELIGSLLSNIHQVPSHVKQATLETLGYLCEEVSPQLEGLSLRSLGEYAYPSKACQSKVPLLVYFHGGGFRVGSASWSCYHEFLTNLPKQIVSLSLWSTIWPLRTLFLLHMMMKGTNEITTRWTVVMRFALLPWKPELVFTGTSVMGINPENGKFCSHVDCWDSIEKNDYFSLEGCTLGYAIAAILGYLMFGEEVESQVTLNLQTGKLSSRMAIYTTLGIFVLEDRVFMSVEMDESCEVT. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10659 317 SUPERFAMILY ARM repeat 3 115 IPR016024 -
Seca3g10659 317 Gene3D - 1 60 IPR011989 -
Seca3g10659 317 Gene3D - 61 122 IPR011989 -
Seca3g10659 317 Pfam Uncharacterized conserved protein (DUF2358) 166 235 IPR018790 -
Seca3g10659 317 SUPERFAMILY alpha/beta-Hydrolases 127 166 IPR029058 -
Seca3g10659 317 Pfam Importin-beta N-terminal domain 23 62 IPR001494 GO:0006886|GO:0031267
Seca3g10659 317 ProSiteProfiles Importin-beta N-terminal domain profile. 23 63 IPR001494 GO:0006886|GO:0031267
Seca3g10659 317 Gene3D alpha/beta hydrolase 123 172 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10659 Seca-Chr3 252358369 252362099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10659 253 295 Amino Acid or Auxin Permease AAAP Family AT5G15240 67.442 2.89e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10659 K14293 - han:110936801 177.178