Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10629 ATGTCTAGCAGAAGATCTCGTTCGAGACAATCTGGTGGTTCCGCTGAGATAAGTGATGCTCAAATCACTGATCTCGTTTCAGCTGCGAAAGTGTTGCAGGAGACTTGCAACTACATTAAGAACTTGCACAGAGAGGTGGATGATTTAAGTGACCGATTATCAGAGCTTTTGGCTACCACTGACTCCAACAGTGCTCAAGCAGCCATTATTAGGATACTACTTAGTGCAGCTAGCATTTATATAATTAATATCTATGCATCTCGATCTCACTTTCTTAATTATTATATATTCTCTTATGTGGCCCGTAGTTACCCTTCATTTCCGCGGAAAACATTAACCGCGGTTTCTAAACCCCAGGTAAGTATCTGTTTTTTTGGTTGGACCACTATTGTATTTACCGGGAAATTAAACCCCCGTTAA 420 0.4071 MSSRRSRSRQSGGSAEISDAQITDLVSAAKVLQETCNYIKNLHREVDDLSDRLSELLATTDSNSAQAAIIRILLSAASIYIINIYASRSHFLNYYIFSYVARSYPSFPRKTLTAVSKPQVSICFFGWTTIVFTGKLNPR. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10629 139 Coils Coil 39 59 - -
Seca3g10629 139 PANTHER TRANSCRIPTION FACTOR PRE 26 74 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10629 Seca-Chr3 251969600 251970393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10629 1 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 55.914 7.73e-24 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10629 - - gmx:100804830 98.2117