Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10604 ATGGCTAAACTAGAAAACTCAAAACCTGGGTGTTTCTCTGGTTTCTTACGCGTGCTTCTTTGTGCTGGAAATGGAACTAGTCCTCCAGTGTATCCATCTGATCATGTTGATGAAAAAGAACCAGTTCATCCCAACAAAGATAAACAGGTGTATGATACAGCTACCCCTGGAGTAGTTGCTAGGTTGATGGGGTTAGATTCACTGCCAAAAACCAACTTTGTAGTGAAAGGAGCCACCTTAGATTCGGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGATTACTTGCTTGAGTTTGATCTAGGCAATGCCAACAACAACCATCGCCGTGTGAAAACCTCAGCATCGTTTCGAGAAGTTCCTTCATTGGTTCAGAGGCAGAACAATGATGTTGTTGAGTTTGACATTGATCATAATGCGGCTAAAGTTCAAGAAGGTAGAGCTAATTTGAGGAAATTGGAAACGGGTTTGGGAGAGTTGAACTTGAAGCAGGGGAAGAAACAGGGGAGTAAGAAGAACAAGGAGGTTGTGAGAGAGAGGGTGAGTTTGAAGAAAGAGAGGAATCAAGGGAAGAACAAGAAGATTTCAAAGTTGAAGAATGAACCAAGAAGGGTCCCTTCTTCTAAGAATAGCTCAAAGGTTCGAAATCATGGTGAAGCTAAAGATTTTTCCCCTGTTTCTCCAAGCTCCAAGAGTTGTACTTGTAGTTATAGATATAGTGGTGCTGGTTCAAGCTCAGGTTCAAACTCAAACTCAAGCTCTCCCTTGCCAAATAGACACAAGAAAGGGTTGGTTGAACCAAAAATCAGAAACAACATGAGAAACCAGCAGTCACCAAAGAAGATAGAGACAGAAAACAGCTTGGAAAATCTCAGTCCTGTTTCAGTTCTAGATAACAATGACTATCATTTCCTTTATGGAATTGATTTTCTAATAGATGGTACAAGCACATTAGCTTCAAAGTCAAAGTGGAAATCTTCAATGCCAGTGTCCTTGGATTATGGTATTAAAGAGGGAGGAAGCAATAATAAAGGATATGCTTACACTGACATCAACAGGGGAGCAGAGTATTACTCAGACATAATGTTGAAGCTTCGTACTTTCGCAGAAGAGGATATAATAAGAGAGTCAGATTGCACAACAAAGCGTATGTGTGAGACTGAAAGCTTTGAGGAAATTTGTTTGGTATTTGAGAACAAAATTTTGGACCTTTTATTGTACGAGGTCGTCAGTGAATTGTAG 1239 0.4036 MAKLENSKPGCFSGFLRVLLCAGNGTSPPVYPSDHVDEKEPVHPNKDKQVYDTATPGVVARLMGLDSLPKTNFVVKGATLDSVPRSRSVNFVDYLLEFDLGNANNNHRRVKTSASFREVPSLVQRQNNDVVEFDIDHNAAKVQEGRANLRKLETGLGELNLKQGKKQGSKKNKEVVRERVSLKKERNQGKNKKISKLKNEPRRVPSSKNSSKVRNHGEAKDFSPVSPSSKSCTCSYRYSGAGSSSGSNSNSSSPLPNRHKKGLVEPKIRNNMRNQQSPKKIETENSLENLSPVSVLDNNDYHFLYGIDFLIDGTSTLASKSKWKSSMPVSLDYGIKEGGSNNKGYAYTDINRGAEYYSDIMLKLRTFAEEDIIRESDCTTKRMCETESFEEICLVFENKILDLLLYEVVSEL. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10604 412 MobiDBLite consensus disorder prediction 160 281 - -
Seca3g10604 412 Pfam DUF761-associated sequence motif 47 72 IPR032795 -
Seca3g10604 412 PANTHER OS05G0128300 PROTEIN 1 412 - -
Seca3g10604 412 MobiDBLite consensus disorder prediction 222 257 - -
Seca3g10604 412 Coils Coil 180 200 - -
Seca3g10604 412 MobiDBLite consensus disorder prediction 164 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10604 Seca-Chr3 251749972 251752280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10604 10 151 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 32.051 1.17e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10604 - - tpra:123924863 413.69