Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10597 ATGGCAACCCAATTGAACCATCTATTCAGAACTTCCATTTTGAAGCACAAGACACAACCAGAGACCCCTTTCACTACAGTAAGAACCACAAGATTTCAAGTAATCAATGCAACATCCTCCTCCACCACCACCAGTGCCAGGCAGCTCATAGAGTCTGGCACCATCAGGAGTATATGGCCACAAGATGCTTCCACAGCTATGAATTCAGAGGGCTTCATTCTCCTTGATGTCAGGCCAACGTGGGAGAGAGAGAAGGCACGTGTGAAGGGGTCTCTGCACGTGCCAATCTTTGTGGAAGACAAGGATAACAGTCCTATAACCCTGCTTAAGAAATGGGTGCATTTTGGTTACATTGGCTTGTGGACTGGCCAATACCTCACTACCCTGAACTCTGAGTTCCTTAGTCAAGTGGAAAATGCCACTCCTGGTAAGGACACCAAGCTTCTTGTGGCATGTGGAGAAGGATTGAGGGTCAATAACAGCAGCTTCAAAGCTGTATAA 501 0.4691 MATQLNHLFRTSILKHKTQPETPFTTVRTTRFQVINATSSSTTTSARQLIESGTIRSIWPQDASTAMNSEGFILLDVRPTWEREKARVKGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYLTTLNSEFLSQVENATPGKDTKLLVACGEGLRVNNSSFKAV. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10597 166 Gene3D - 40 165 IPR036873 -
Seca3g10597 166 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 158 IPR044614 -
Seca3g10597 166 CDD RHOD 62 110 - -
Seca3g10597 166 ProSiteProfiles Rhodanese domain profile. 68 157 IPR001763 -
Seca3g10597 166 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 50 158 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10597 Seca-Chr3 251587352 251589983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10597 1 157 Sulfurtransferasese or Rhodanese AT3G08920 52.229 1.63e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10597 - - gmx:100795945 256.529