Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10588 ATGGCAACTGCCAACGCAACCGCAGCCGCTACTTCATCCTTCATCGGAACCCGTCTCCGCGACGTGCATTCAAATTCGGGTCGGGTACAAGCCAGGTTCGGGTTCGGAGGCAAGAAAAGTGCGCCTAAGAAGACCGCGAGGCCGGGTCCTACTTCGGATCGTCCGCTGTGGTACCCGGGAGCGAAGGCGCCGGAGTGGCTGGACGGTAGTTTGGTCGGCGATTACGGATTCGACCCGTTCGGGTTGGGGAAGCCAGCGGAGTACTTGCAGTTCGATCTGGACTCACTGGACCAAAACCTGGCAAAGAACTCCGCCGGAGACGTGATCGGAACAAGGACAGAGGTGGCGGACGTGAAACCGACGCCGTTTCAGCCGTACAGTGAGGTGTTCGGGCTACAGAGGTTCAGGGAGTGCGAGCTCATCCATGGAAGGTGGGCCATGCTGGCCACGCTTGGAGCCCTCACCGTCGAGTGGCTCACCGGAATTACCTGGCAAGACGCCGGGAAGGTGGTGGAGCTAGTGGAAGGATCATCATACCTTGGGCAACCACTTCCATTCTCACTTACAACATTGATTTGGATTGAAGTTCTGGTGATTGGATATATTGAGTTCCAAAGGAATGCTGAGCTTGACCCAGAGAAGAGGCTGTACCCAGGTGGCAAGTTCTTCGACCCTCTTGGCTTGGCCGCAGACCCTGAGAAGAAAGCCACCCTTCAATTGGCTGAAATCAAGCATGCTCGTCTTGCCATGGTTGCTTTCCTTGGCTTTGCAGTTCAAGCTGCTGCCACTGGCAAAGGCCCTCTTAACAACTGGGCTACCCATTTGAGTGACCCTCTTCACACAACCATCATTGATACCTTCTCTTCCTCCTAA 873 0.5556 MATANATAAATSSFIGTRLRDVHSNSGRVQARFGFGGKKSAPKKTARPGPTSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNSAGDVIGTRTEVADVKPTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10588 290 MobiDBLite consensus disorder prediction 31 57 - -
Seca3g10588 290 Pfam Chlorophyll A-B binding protein 63 260 IPR022796 -
Seca3g10588 290 Gene3D Chlorophyll a/b binding protein domain 57 290 - -
Seca3g10588 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 286 IPR001344 GO:0009765|GO:0016020
Seca3g10588 290 SUPERFAMILY Chlorophyll a-b binding protein 49 288 - -
Seca3g10588 290 FunFam Chlorophyll a-b binding protein, chloroplastic 108 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10588 Seca-Chr3 251498108 251500177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10588 14 290 Chloroplast and Mitochondria Gene Families AT3G08940 85.252 4.23e-174 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10588 K08915 - rcu:8267514 529.635